姜黄素对放射/化疗诱发的口腔黏膜炎的影响:结合元分析、网络药理学、分子对接和分子动力学模拟。

IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Zhi-Xing Chen, Ya-Shi Qin, Bang-Hui Shi, Bi-Yun Gao, Ren-Chuan Tao, Xiang-Zhi Yong
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引用次数: 0

摘要

本研究旨在探讨姜黄素对放疗/化疗引起的口腔黏膜炎(R/CIOM)的影响,并初步探索其作用机制。研究人员从 PubMed、Embase、Web of Science、Cochrane Library、Medline 和 Google Scholar 数据库中查找随机对照试验。使用 RevMan 5.4 进行统计分析,计算综合风险比(RRs)。通过网络药理学、分子对接和分子动力学模拟分析了姜黄素的作用机制。姜黄素的靶标收集于 HERB、PharmMapper、Targetnet、Swiss Target Prediction 和 SuperPred。OMIM、GeneCards 和 Disgenet 用于收集 R/CIOM 的相关靶标。使用 Cytoscape 软件 3.8.0 构建成分-靶标-通路网络。使用 STRING 数据库构建了蛋白质-蛋白质相互作用(PPI)网络。GO和KEGG富集分析由Metascape软件完成。使用 AutoDock Vina 4.2 软件进行分子对接。分子动力学模拟由 Gromacs v2022.03 进行。结果发现,共纳入了 12 项研究,涉及 565 名患者。元分析表明,姜黄素能降低严重 R/CIOM 的发生率(RR 0.42 [0.24, 0.75])和 R/CIOM 的平均严重程度(MD -0.93 [-1.34, -0.52])。姜黄素治疗 R/CIOM 的核心靶基因有 11 个。分子对接和分子动力学模拟结果表明,姜黄素与MAPK3、SRC和TNF等靶蛋白具有很强的结合能和稳定性。总之,这些研究结果表明姜黄素能有效改善严重的R/CIOM,可能是通过影响MAPK3、SRC和TNF。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Effects of Curcumin on Radiation/Chemotherapy-Induced Oral Mucositis: Combined Meta-Analysis, Network Pharmacology, Molecular Docking, and Molecular Dynamics Simulation.

The study aims to investigate the effects of curcumin on radiation/chemotherapy-induced oral mucositis (R/CIOM) and preliminarily explore its mechanism. Randomized controlled trials were identified from the PubMed, Embase, Web of Science, Cochrane Library, Medline, and Google Scholar databases. RevMan 5.4 was used for statistical analysis to calculate the combined risk ratios (RRs). The mechanism was analyzed through network pharmacology, molecular docking, and a molecular dynamics simulation. The targets of curcumin were collected in HERB, PharmMapper, Targetnet, Swiss Target Prediction, and SuperPred. OMIM, GeneCards, and Disgenet were used to collect relevant targets for R/CIOM. Cytoscape software 3.8.0 was used to construct the component-target-pathway network. Protein-Protein Interaction (PPI) networks were constructed using the STRING database. GO and KEGG enrichment analyses were performed by Metascape. AutoDock Vina 4.2 software was used for molecular docking. The molecular dynamics simulation was performed by Gromacs v2022.03. It is found that 12 studies involving 565 patients were included. Meta-analyses showed that curcumin reduced the incidence of severe R/CIOM (RR 0.42 [0.24, 0.75]) and the mean severity of R/CIOM (MD -0.93 [-1.34, -0.52]). Eleven core target genes were identified in the treatment of R/CIOM with curcumin. The results of molecular docking and the molecular dynamics simulation showed that curcumin had strong binding energy and stability with target proteins including MAPK3, SRC, and TNF. Overall, these findings suggest curcumin can effectively improve severe R/CIOM, perhaps by affecting MAPK3, SRC, and TNF.

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来源期刊
Current Issues in Molecular Biology
Current Issues in Molecular Biology 生物-生化研究方法
CiteScore
2.90
自引率
3.20%
发文量
380
审稿时长
>12 weeks
期刊介绍: Current Issues in Molecular Biology (CIMB) is a peer-reviewed journal publishing review articles and minireviews in all areas of molecular biology and microbiology. Submitted articles are subject to an Article Processing Charge (APC) and are open access immediately upon publication. All manuscripts undergo a peer-review process.
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