{"title":"Plecialongiforceps Duda, 1933 (Diptera, Bibionidae) 的完整线粒体基因组及其对 Bibionidae 科系统发育的影响。","authors":"Seunghun Jung, Sangil Kim, Seunggwan Shin","doi":"10.3897/zookeys.1212.117845","DOIUrl":null,"url":null,"abstract":"<p><p>Over the past decade, the prevalence of mass outbreaks involving non-native insects has sparked concerns about their potential negative impact on human inhabited areas and local environments. <i>Plecialongiforceps</i> Duda, 1933 (Diptera, Bibionidae) was recently recognized as an invasive pest in South Korea, causing public nuisance through mass outbreaks in the Seoul Metropolitan Area during early summer. In this study, we present the first complete mitochondrial genome of <i>Plecialongiforceps</i>, generated from the PacBio HiFi long-read sequencing data. Notably, the length of the circular genome is found to be larger than any annotated reference sequences of mitochondrial genomes for the infraorder Bibionomorpha, which is attributable to an unusually long A+T rich control region. We conducted a phylogenetic analysis of Bibionomorpha, focusing specifically on the family Bibionidae, using nearly all available mitochondrial genome data to elucidate relationships among genera within Bibionidae. Our phylogeny of Bibionomorpha recovered a strong monophyly of the family Bibionidae and its three subfamilies: Bibioninae (<i>Bibio</i> + <i>Dilophus</i>), Hesperininae (<i>Hesperinus</i> + <i>Penthetria</i>), and Pleciinae (<i>Plecia</i>), corroborating the recently proposed taxonomic classification system of Bibionidae. Furthermore, we discuss evolutionary trends within Bibionidae based on our well-supported higher relationships of the superfamily Bibionoidea.</p>","PeriodicalId":24051,"journal":{"name":"ZooKeys","volume":"1212 ","pages":"1-15"},"PeriodicalIF":1.3000,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11413505/pdf/","citationCount":"0","resultStr":"{\"title\":\"Complete mitochondrial genome of <i>Plecialongiforceps</i> Duda, 1933 (Diptera, Bibionidae) and its implications for a phylogeny of the family Bibionidae.\",\"authors\":\"Seunghun Jung, Sangil Kim, Seunggwan Shin\",\"doi\":\"10.3897/zookeys.1212.117845\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Over the past decade, the prevalence of mass outbreaks involving non-native insects has sparked concerns about their potential negative impact on human inhabited areas and local environments. <i>Plecialongiforceps</i> Duda, 1933 (Diptera, Bibionidae) was recently recognized as an invasive pest in South Korea, causing public nuisance through mass outbreaks in the Seoul Metropolitan Area during early summer. In this study, we present the first complete mitochondrial genome of <i>Plecialongiforceps</i>, generated from the PacBio HiFi long-read sequencing data. Notably, the length of the circular genome is found to be larger than any annotated reference sequences of mitochondrial genomes for the infraorder Bibionomorpha, which is attributable to an unusually long A+T rich control region. We conducted a phylogenetic analysis of Bibionomorpha, focusing specifically on the family Bibionidae, using nearly all available mitochondrial genome data to elucidate relationships among genera within Bibionidae. Our phylogeny of Bibionomorpha recovered a strong monophyly of the family Bibionidae and its three subfamilies: Bibioninae (<i>Bibio</i> + <i>Dilophus</i>), Hesperininae (<i>Hesperinus</i> + <i>Penthetria</i>), and Pleciinae (<i>Plecia</i>), corroborating the recently proposed taxonomic classification system of Bibionidae. Furthermore, we discuss evolutionary trends within Bibionidae based on our well-supported higher relationships of the superfamily Bibionoidea.</p>\",\"PeriodicalId\":24051,\"journal\":{\"name\":\"ZooKeys\",\"volume\":\"1212 \",\"pages\":\"1-15\"},\"PeriodicalIF\":1.3000,\"publicationDate\":\"2024-09-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11413505/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ZooKeys\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3897/zookeys.1212.117845\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"ZOOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ZooKeys","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3897/zookeys.1212.117845","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"ZOOLOGY","Score":null,"Total":0}
Complete mitochondrial genome of Plecialongiforceps Duda, 1933 (Diptera, Bibionidae) and its implications for a phylogeny of the family Bibionidae.
Over the past decade, the prevalence of mass outbreaks involving non-native insects has sparked concerns about their potential negative impact on human inhabited areas and local environments. Plecialongiforceps Duda, 1933 (Diptera, Bibionidae) was recently recognized as an invasive pest in South Korea, causing public nuisance through mass outbreaks in the Seoul Metropolitan Area during early summer. In this study, we present the first complete mitochondrial genome of Plecialongiforceps, generated from the PacBio HiFi long-read sequencing data. Notably, the length of the circular genome is found to be larger than any annotated reference sequences of mitochondrial genomes for the infraorder Bibionomorpha, which is attributable to an unusually long A+T rich control region. We conducted a phylogenetic analysis of Bibionomorpha, focusing specifically on the family Bibionidae, using nearly all available mitochondrial genome data to elucidate relationships among genera within Bibionidae. Our phylogeny of Bibionomorpha recovered a strong monophyly of the family Bibionidae and its three subfamilies: Bibioninae (Bibio + Dilophus), Hesperininae (Hesperinus + Penthetria), and Pleciinae (Plecia), corroborating the recently proposed taxonomic classification system of Bibionidae. Furthermore, we discuss evolutionary trends within Bibionidae based on our well-supported higher relationships of the superfamily Bibionoidea.
期刊介绍:
ZooKeys is a peer-reviewed, open-access, online and print, rapidly produced journal launched to support free exchange of ideas and information in systematic zoology, phylogeny and biogeography.
All papers can be freely copied, downloaded, printed and distributed at no charge. Authors and readers are thus encouraged to post the pdf files of published papers on homepages or elsewhere to expedite distribution. There is no charge for color.