Rosana M. Lobayan, Patricio F. Provasi, Alicia B. Pomilio
{"title":"A 型二聚原花青素稳定过程中的宝石耦合常数的 AIM/NBO 分析:角度依赖性。","authors":"Rosana M. Lobayan, Patricio F. Provasi, Alicia B. Pomilio","doi":"10.1002/mrc.5479","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>The angular dependence of the indirect short-range spin-spin coupling constants (SSCC), the geminal \n<span></span><math>\n <semantics>\n <mrow>\n <mi>J</mi>\n <mo>(</mo>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <mn>3</mn>\n </mrow>\n </msub>\n <mo>,</mo>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <msup>\n <mrow>\n <mn>1</mn>\n </mrow>\n <mrow>\n <mo>′</mo>\n </mrow>\n </msup>\n </mrow>\n </msub>\n <mo>)</mo>\n </mrow>\n <annotation>$$ J\\left({C}_3,{C}_{1&amp;#x0005E;{\\prime }}\\right) $$</annotation>\n </semantics></math>, \n<span></span><math>\n <semantics>\n <mrow>\n <mi>J</mi>\n <mo>(</mo>\n <msub>\n <mrow>\n <mi>O</mi>\n </mrow>\n <mrow>\n <mn>1</mn>\n </mrow>\n </msub>\n <mo>,</mo>\n <mi>O</mi>\n <mo>)</mo>\n </mrow>\n <annotation>$$ J\\left({O}_1,O\\right) $$</annotation>\n </semantics></math>, and \n<span></span><math>\n <semantics>\n <mrow>\n <mi>J</mi>\n <mo>(</mo>\n <mi>O</mi>\n <mo>,</mo>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <msup>\n <mrow>\n <mn>1</mn>\n </mrow>\n <mrow>\n <mo>′</mo>\n </mrow>\n </msup>\n </mrow>\n </msub>\n <mo>)</mo>\n </mrow>\n <annotation>$$ J\\left(O,{C}_{1&amp;#x0005E;{\\prime }}\\right) $$</annotation>\n </semantics></math> in A-type dimeric proanthocyanidin, was investigated using density functional theory. We studied the rotation of ring B around the \n<span></span><math>\n <semantics>\n <mrow>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <mn>2</mn>\n </mrow>\n </msub>\n <mtext>–</mtext>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <msup>\n <mrow>\n <mn>1</mn>\n </mrow>\n <mrow>\n <mo>′</mo>\n </mrow>\n </msup>\n </mrow>\n </msub>\n </mrow>\n <annotation>$$ {C}_2\\hbox{--} {C}_{1&amp;#x0005E;{\\prime }} $$</annotation>\n </semantics></math> bond. Therefore, we calculated hyperconjugative charge transfers and bond polarizations within the natural bond orbital (NBO) approach, performing a topological study based on Bader's theory, AIM (atoms in molecules), and analyzing the angular dependence of AIM/NBO parameters. The results describe a relationship between the geminal coupling that changes with angular variation and NBO charge transfers to the bonds involved in the coupling pathways that can explain the behavior of the former property. Based on AIM/NBO data, inductive and mesomeric effects were described and quantified, showing a clear correlation with the stabilization of the structure, demonstrating a resonance-assisted inductive effect. We also set out strong hyperconjugative interactions (anomeric effect) involving nonbonding electron pairs of oxygen atoms. This analysis of coupling constants supports previous models by other authors and shows the application in this particular case. Moreover, the SSCCs studied herein are used for identifying stable structures and conformational search analysis of flavonoids. Finally, our results show the relationship between SSCCs and the structure stabilization and charge delocalization effects.</p>\n </div>","PeriodicalId":18142,"journal":{"name":"Magnetic Resonance in Chemistry","volume":"62 12","pages":"825-840"},"PeriodicalIF":1.9000,"publicationDate":"2024-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"AIM/NBO Analysis of the Geminal Coupling Constants in the Stabilization of A-Type Dimeric Proanthocyanidin: Angular Dependence\",\"authors\":\"Rosana M. Lobayan, Patricio F. Provasi, Alicia B. Pomilio\",\"doi\":\"10.1002/mrc.5479\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n <p>The angular dependence of the indirect short-range spin-spin coupling constants (SSCC), the geminal \\n<span></span><math>\\n <semantics>\\n <mrow>\\n <mi>J</mi>\\n <mo>(</mo>\\n <msub>\\n <mrow>\\n <mi>C</mi>\\n </mrow>\\n <mrow>\\n <mn>3</mn>\\n </mrow>\\n </msub>\\n <mo>,</mo>\\n <msub>\\n <mrow>\\n <mi>C</mi>\\n </mrow>\\n <mrow>\\n <msup>\\n <mrow>\\n <mn>1</mn>\\n </mrow>\\n <mrow>\\n <mo>′</mo>\\n </mrow>\\n </msup>\\n </mrow>\\n </msub>\\n <mo>)</mo>\\n </mrow>\\n <annotation>$$ J\\\\left({C}_3,{C}_{1&amp;#x0005E;{\\\\prime }}\\\\right) $$</annotation>\\n </semantics></math>, \\n<span></span><math>\\n <semantics>\\n <mrow>\\n <mi>J</mi>\\n <mo>(</mo>\\n <msub>\\n <mrow>\\n <mi>O</mi>\\n </mrow>\\n <mrow>\\n <mn>1</mn>\\n </mrow>\\n </msub>\\n <mo>,</mo>\\n <mi>O</mi>\\n <mo>)</mo>\\n </mrow>\\n <annotation>$$ J\\\\left({O}_1,O\\\\right) $$</annotation>\\n </semantics></math>, and \\n<span></span><math>\\n <semantics>\\n <mrow>\\n <mi>J</mi>\\n <mo>(</mo>\\n <mi>O</mi>\\n <mo>,</mo>\\n <msub>\\n <mrow>\\n <mi>C</mi>\\n </mrow>\\n <mrow>\\n <msup>\\n <mrow>\\n <mn>1</mn>\\n </mrow>\\n <mrow>\\n <mo>′</mo>\\n </mrow>\\n </msup>\\n </mrow>\\n </msub>\\n <mo>)</mo>\\n </mrow>\\n <annotation>$$ J\\\\left(O,{C}_{1&amp;#x0005E;{\\\\prime }}\\\\right) $$</annotation>\\n </semantics></math> in A-type dimeric proanthocyanidin, was investigated using density functional theory. We studied the rotation of ring B around the \\n<span></span><math>\\n <semantics>\\n <mrow>\\n <msub>\\n <mrow>\\n <mi>C</mi>\\n </mrow>\\n <mrow>\\n <mn>2</mn>\\n </mrow>\\n </msub>\\n <mtext>–</mtext>\\n <msub>\\n <mrow>\\n <mi>C</mi>\\n </mrow>\\n <mrow>\\n <msup>\\n <mrow>\\n <mn>1</mn>\\n </mrow>\\n <mrow>\\n <mo>′</mo>\\n </mrow>\\n </msup>\\n </mrow>\\n </msub>\\n </mrow>\\n <annotation>$$ {C}_2\\\\hbox{--} {C}_{1&amp;#x0005E;{\\\\prime }} $$</annotation>\\n </semantics></math> bond. Therefore, we calculated hyperconjugative charge transfers and bond polarizations within the natural bond orbital (NBO) approach, performing a topological study based on Bader's theory, AIM (atoms in molecules), and analyzing the angular dependence of AIM/NBO parameters. The results describe a relationship between the geminal coupling that changes with angular variation and NBO charge transfers to the bonds involved in the coupling pathways that can explain the behavior of the former property. Based on AIM/NBO data, inductive and mesomeric effects were described and quantified, showing a clear correlation with the stabilization of the structure, demonstrating a resonance-assisted inductive effect. We also set out strong hyperconjugative interactions (anomeric effect) involving nonbonding electron pairs of oxygen atoms. This analysis of coupling constants supports previous models by other authors and shows the application in this particular case. Moreover, the SSCCs studied herein are used for identifying stable structures and conformational search analysis of flavonoids. Finally, our results show the relationship between SSCCs and the structure stabilization and charge delocalization effects.</p>\\n </div>\",\"PeriodicalId\":18142,\"journal\":{\"name\":\"Magnetic Resonance in Chemistry\",\"volume\":\"62 12\",\"pages\":\"825-840\"},\"PeriodicalIF\":1.9000,\"publicationDate\":\"2024-09-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Magnetic Resonance in Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/mrc.5479\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Magnetic Resonance in Chemistry","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/mrc.5479","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
摘要
间接短程自旋-自旋耦合常数(SSCC)的角度依赖性,geminal J ( C 3 , C 1 ' ) $$ J\left({C}_3,{C}_{1^{\prime }}\right) $$ , J ( O 1 、O ) $$ J\left({O}_1,O\right) $$ , 和 J ( O , C 1 ' ) $$ J\left(O,{C}_{1^{\prime }}\right) $$ 在 A 型二聚原花青素中的作用。我们研究了环 B 围绕 C 2 - C 1 ' $$ {C}_2\hbox{--} 的旋转。{C}_{1^\{prime }}$$ 键的旋转。因此,我们在自然键轨道(NBO)方法中计算了超共轭电荷转移和键极化,根据贝德尔理论、AIM(分子中的原子)进行了拓扑研究,并分析了 AIM/NBO 参数的角度依赖性。研究结果描述了随角度变化而变化的宝石耦合与 NBO 电荷转移到耦合途径所涉及的键之间的关系,这种关系可以解释前一种性质的行为。根据 AIM/NBO 数据,我们描述并量化了感应效应和介观效应,结果显示它们与结构的稳定有明显的相关性,证明了共振辅助感应效应。我们还列出了涉及氧原子非键电子对的强超共轭相互作用(同分异构效应)。对耦合常数的分析支持了其他作者以前的模型,并显示了在这种特殊情况下的应用。此外,本文研究的 SSCC 可用于确定黄酮类化合物的稳定结构和构象搜索分析。最后,我们的研究结果表明了 SSCC 与结构稳定和电荷分散效应之间的关系。
AIM/NBO Analysis of the Geminal Coupling Constants in the Stabilization of A-Type Dimeric Proanthocyanidin: Angular Dependence
The angular dependence of the indirect short-range spin-spin coupling constants (SSCC), the geminal
,
, and
in A-type dimeric proanthocyanidin, was investigated using density functional theory. We studied the rotation of ring B around the
bond. Therefore, we calculated hyperconjugative charge transfers and bond polarizations within the natural bond orbital (NBO) approach, performing a topological study based on Bader's theory, AIM (atoms in molecules), and analyzing the angular dependence of AIM/NBO parameters. The results describe a relationship between the geminal coupling that changes with angular variation and NBO charge transfers to the bonds involved in the coupling pathways that can explain the behavior of the former property. Based on AIM/NBO data, inductive and mesomeric effects were described and quantified, showing a clear correlation with the stabilization of the structure, demonstrating a resonance-assisted inductive effect. We also set out strong hyperconjugative interactions (anomeric effect) involving nonbonding electron pairs of oxygen atoms. This analysis of coupling constants supports previous models by other authors and shows the application in this particular case. Moreover, the SSCCs studied herein are used for identifying stable structures and conformational search analysis of flavonoids. Finally, our results show the relationship between SSCCs and the structure stabilization and charge delocalization effects.
期刊介绍:
MRC is devoted to the rapid publication of papers which are concerned with the development of magnetic resonance techniques, or in which the application of such techniques plays a pivotal part. Contributions from scientists working in all areas of NMR, ESR and NQR are invited, and papers describing applications in all branches of chemistry, structural biology and materials chemistry are published.
The journal is of particular interest not only to scientists working in academic research, but also those working in commercial organisations who need to keep up-to-date with the latest practical applications of magnetic resonance techniques.