{"title":"论粗粒度分子动力学模型对非平衡态过程的泛化能力","authors":"Liyao Lyu, Huan Lei","doi":"arxiv-2409.11519","DOIUrl":null,"url":null,"abstract":"One essential goal of constructing coarse-grained molecular dynamics (CGMD)\nmodels is to accurately predict non-equilibrium processes beyond the atomistic\nscale. While a CG model can be constructed by projecting the full dynamics onto\na set of resolved variables, the dynamics of the CG variables can recover the\nfull dynamics only when the conditional distribution of the unresolved\nvariables is close to the one associated with the particular projection\noperator. In particular, the model's applicability to various non-equilibrium\nprocesses is generally unwarranted due to the inconsistency in the conditional\ndistribution. Here, we present a data-driven approach for constructing CGMD\nmodels that retain certain generalization ability for non-equilibrium\nprocesses. Unlike the conventional CG models based on pre-selected CG variables\n(e.g., the center of mass), the present CG model seeks a set of auxiliary CG\nvariables based on the time-lagged independent component analysis to minimize\nthe entropy contribution of the unresolved variables. This ensures the\ndistribution of the unresolved variables under a broad range of non-equilibrium\nconditions approaches the one under equilibrium. Numerical results of a polymer\nmelt system demonstrate the significance of this broadly-overlooked metric for\nthe model's generalization ability, and the effectiveness of the present CG\nmodel for predicting the complex viscoelastic responses under various\nnon-equilibrium flows.","PeriodicalId":501340,"journal":{"name":"arXiv - STAT - Machine Learning","volume":"89 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"On the generalization ability of coarse-grained molecular dynamics models for non-equilibrium processes\",\"authors\":\"Liyao Lyu, Huan Lei\",\"doi\":\"arxiv-2409.11519\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"One essential goal of constructing coarse-grained molecular dynamics (CGMD)\\nmodels is to accurately predict non-equilibrium processes beyond the atomistic\\nscale. While a CG model can be constructed by projecting the full dynamics onto\\na set of resolved variables, the dynamics of the CG variables can recover the\\nfull dynamics only when the conditional distribution of the unresolved\\nvariables is close to the one associated with the particular projection\\noperator. In particular, the model's applicability to various non-equilibrium\\nprocesses is generally unwarranted due to the inconsistency in the conditional\\ndistribution. Here, we present a data-driven approach for constructing CGMD\\nmodels that retain certain generalization ability for non-equilibrium\\nprocesses. Unlike the conventional CG models based on pre-selected CG variables\\n(e.g., the center of mass), the present CG model seeks a set of auxiliary CG\\nvariables based on the time-lagged independent component analysis to minimize\\nthe entropy contribution of the unresolved variables. This ensures the\\ndistribution of the unresolved variables under a broad range of non-equilibrium\\nconditions approaches the one under equilibrium. Numerical results of a polymer\\nmelt system demonstrate the significance of this broadly-overlooked metric for\\nthe model's generalization ability, and the effectiveness of the present CG\\nmodel for predicting the complex viscoelastic responses under various\\nnon-equilibrium flows.\",\"PeriodicalId\":501340,\"journal\":{\"name\":\"arXiv - STAT - Machine Learning\",\"volume\":\"89 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-09-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - STAT - Machine Learning\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2409.11519\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - STAT - Machine Learning","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2409.11519","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
On the generalization ability of coarse-grained molecular dynamics models for non-equilibrium processes
One essential goal of constructing coarse-grained molecular dynamics (CGMD)
models is to accurately predict non-equilibrium processes beyond the atomistic
scale. While a CG model can be constructed by projecting the full dynamics onto
a set of resolved variables, the dynamics of the CG variables can recover the
full dynamics only when the conditional distribution of the unresolved
variables is close to the one associated with the particular projection
operator. In particular, the model's applicability to various non-equilibrium
processes is generally unwarranted due to the inconsistency in the conditional
distribution. Here, we present a data-driven approach for constructing CGMD
models that retain certain generalization ability for non-equilibrium
processes. Unlike the conventional CG models based on pre-selected CG variables
(e.g., the center of mass), the present CG model seeks a set of auxiliary CG
variables based on the time-lagged independent component analysis to minimize
the entropy contribution of the unresolved variables. This ensures the
distribution of the unresolved variables under a broad range of non-equilibrium
conditions approaches the one under equilibrium. Numerical results of a polymer
melt system demonstrate the significance of this broadly-overlooked metric for
the model's generalization ability, and the effectiveness of the present CG
model for predicting the complex viscoelastic responses under various
non-equilibrium flows.