利用 3D Prompt-ResUNet 为宫颈癌高剂量率近距离放射治疗进行基于深度学习的分割。

Xian Xue,Lining Sun,Dazhu Liang,Jingyang Zhu,Lele Liu,Quanfu Sun,Hefeng Liu,Jianwei Gao,Xiaosha Fu,Jingjing Ding,Xiangkun Dai,Laiyuan Tao,Jinsheng Cheng,Tengxiang Li,Fugen Zhou
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Approach. We used 73 computed tomography (CT) and 62 magnetic resonance imaging (MRI) scans from 135 (103 for training, 16 for validation, and 16 for testing) cervical cancer patients across two hospitals for HRCTV and OAR segmentation. A novel comparison of the deep learning neural networks 3D Prompt-ResUNet, nnUNet, and SAM-Med3D was applied for the segmentation. Evaluation was conducted in two parts: geometric and clinical assessments. Quantitative metrics included the Dice similarity coefficient (DSC), 95th percentile Hausdorff distance (HD95%), Jaccard index (JI), and Matthews correlation coefficient (MCC). Clinical evaluation involved interobserver comparison, 4-grade expert scoring, and a double-blinded Turing test.
Main results. The Prompt-ResUNet model performed most similarly to experienced radiation oncologists, outperforming less experienced ones. During testing, the DSC, HD95% (mm), JI, and MCC value (mean ± SD) for HRCTV were 0.92±0.03, 2.91 ± 0.69, 0.85± 0.04, and 0.92 ± 0.02, respectively. For the bladder, these values were 0.93 ± 0.05, 3.07 ± 1.05, 0.87 ± 0.08, and 0.93 ± 0.05, respectively. For the rectum, they were 0.87 ± 0.03, 3.54 ± 1.46, 0.78 ± 0.05, and 0.87 ± 0.03, respectively. For the sigmoid, they were 0.76 ± 0.11, 7.54 ± 5.54, 0.63 ± 0.14, and 0.78 ± 0.09, respectively. The Prompt-ResUNet achieved a clinical viability score of at least 2 in all evaluation cases (100%) for both HRCTV and bladder and exceeded the 30% positive rate benchmark for all evaluated structures in the Turing test.
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引用次数: 0

摘要

目的:开发并评估三维提示-ResUNet模块,该模块利用基于提示的模型与三维nnUNet相结合,对宫颈癌患者高剂量率近距离治疗中的高风险临床靶体积和风险器官进行快速、一致的自动分割。我们使用两家医院 135 名宫颈癌患者(103 人用于训练,16 人用于验证,16 人用于测试)的 73 张计算机断层扫描(CT)和 62 张磁共振成像(MRI)扫描图像进行 HRCTV 和 OAR 分割。在分割过程中,对深度学习神经网络 3D Prompt-ResUNet、nnUNet 和 SAM-Med3D 进行了新颖的比较。评估分两部分进行:几何评估和临床评估。定量指标包括狄斯相似系数(DSC)、第95百分位数豪斯多夫距离(HD95%)、雅卡指数(JI)和马修斯相关系数(MCC)。临床评估包括观察者间比较、四级专家评分和双盲图灵测试。Prompt-ResUNet 模型与经验丰富的放射肿瘤专家的表现最为相似,优于经验较少的放射肿瘤专家。测试期间,HRCTV 的 DSC、HD95% (mm)、JI 和 MCC 值(平均值±标度)分别为 0.92±0.03、2.91±0.69、0.85±0.04 和 0.92±0.02。膀胱的这一数值分别为 0.93±0.05、3.07±1.05、0.87±0.08 和 0.93±0.05。直肠的数值分别为 0.87 ± 0.03、3.54 ± 1.46、0.78 ± 0.05 和 0.87 ± 0.03。乙状结肠分别为 0.76 ± 0.11、7.54 ± 5.54、0.63 ± 0.14 和 0.78 ± 0.09。在所有评估案例中,Prompt-ResUNet 对 HRCTV 和膀胱的临床可行性评分均达到至少 2 分(100%),并且在图灵测试中,所有评估结构的阳性率均超过了 30% 的基准。Prompt-ResUNet架构在HRCTV和OARs的自动分割方面与地面实况(GT)高度一致,减少了观察者之间的差异,缩短了治疗时间。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Deep learning-based segmentation for high-dose-rate brachytherapy in cervical cancer using 3D Prompt-ResUNet.
To develop and evaluate a 3D Prompt-ResUNet module that utilized the prompt-based model combined with 3D nnUNet for rapid and consistent autosegmentation of high-risk clinical target volume and organ at risk in high-dose-rate brachytherapy for cervical cancer patients. Approach. We used 73 computed tomography (CT) and 62 magnetic resonance imaging (MRI) scans from 135 (103 for training, 16 for validation, and 16 for testing) cervical cancer patients across two hospitals for HRCTV and OAR segmentation. A novel comparison of the deep learning neural networks 3D Prompt-ResUNet, nnUNet, and SAM-Med3D was applied for the segmentation. Evaluation was conducted in two parts: geometric and clinical assessments. Quantitative metrics included the Dice similarity coefficient (DSC), 95th percentile Hausdorff distance (HD95%), Jaccard index (JI), and Matthews correlation coefficient (MCC). Clinical evaluation involved interobserver comparison, 4-grade expert scoring, and a double-blinded Turing test. Main results. The Prompt-ResUNet model performed most similarly to experienced radiation oncologists, outperforming less experienced ones. During testing, the DSC, HD95% (mm), JI, and MCC value (mean ± SD) for HRCTV were 0.92±0.03, 2.91 ± 0.69, 0.85± 0.04, and 0.92 ± 0.02, respectively. For the bladder, these values were 0.93 ± 0.05, 3.07 ± 1.05, 0.87 ± 0.08, and 0.93 ± 0.05, respectively. For the rectum, they were 0.87 ± 0.03, 3.54 ± 1.46, 0.78 ± 0.05, and 0.87 ± 0.03, respectively. For the sigmoid, they were 0.76 ± 0.11, 7.54 ± 5.54, 0.63 ± 0.14, and 0.78 ± 0.09, respectively. The Prompt-ResUNet achieved a clinical viability score of at least 2 in all evaluation cases (100%) for both HRCTV and bladder and exceeded the 30% positive rate benchmark for all evaluated structures in the Turing test. Significance. The Prompt-ResUNet architecture demonstrated high consistency with ground truth (GT) in autosegmentation of HRCTV and OARs, reducing interobserver variability and shortening treatment times. .
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