利用高效内存学习型原始双架构进行三维螺旋 CT 重构

IF 4.2 2区 计算机科学 Q2 ENGINEERING, ELECTRICAL & ELECTRONIC
Jevgenija Rudzusika;Buda Bajić;Thomas Koehler;Ozan Öktem
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引用次数: 0

摘要

基于深度学习的计算机断层扫描(CT)重建在模拟二维低剂量 CT 数据上表现出色。这尤其适用于领域适应性神经网络,该网络结合了手工制作的 CT 成像物理模型。经验证据表明,采用这种架构可以减少对训练数据的需求,并提高泛化能力。然而,它们的训练需要大量的计算资源,这在三维螺旋 CT 中很快就会变得令人望而却步,而三维螺旋 CT 是医学成像中最常用的采集几何图形。本文修改了一个适应领域的神经网络架构--学习原始双(LPD),使其可以在这种情况下进行训练并应用于重建。主要挑战在于如何在训练过程中减少 GPU 内存需求,同时将计算时间控制在实际范围内。此外,临床数据还存在模拟中没有考虑到的其他挑战,如通量测量误差、分辨率不匹配,以及最重要的,缺乏真实的地面实况。据我们所知,这项工作是首次在全尺寸临床数据(如低剂量 CT 图像和投影数据集 (LDCT) 中的数据)上应用非滚动深度学习架构进行重建。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
3D Helical CT Reconstruction With a Memory Efficient Learned Primal-Dual Architecture
Deep learning based computed tomography (CT) reconstruction has demonstrated outstanding performance on simulated 2D low-dose CT data. This applies in particular to domain adapted neural networks, which incorporate a handcrafted physics model for CT imaging. Empirical evidence shows that employing such architectures reduces the demand for training data and improves upon generalization. However, their training requires large computational resources that quickly become prohibitive in 3D helical CT, which is the most common acquisition geometry used for medical imaging. This paper modifies a domain adapted neural network architecture, the Learned Primal-Dual (LPD), so that it can be trained and applied to reconstruction in this setting. The main challenge is to reduce the GPU memory requirements during the training, while keeping the computational time within practical limits. Furthermore, clinical data also comes with other challenges not accounted for in simulations, like errors in flux measurement, resolution mismatch and, most importantly, the absence of the real ground truth. To the best of our knowledge, this work is the first to apply an unrolled deep learning architecture for reconstruction on full-sized clinical data, like those in the Low dose CT image and projection data set (LDCT).
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来源期刊
IEEE Transactions on Computational Imaging
IEEE Transactions on Computational Imaging Mathematics-Computational Mathematics
CiteScore
8.20
自引率
7.40%
发文量
59
期刊介绍: The IEEE Transactions on Computational Imaging will publish articles where computation plays an integral role in the image formation process. Papers will cover all areas of computational imaging ranging from fundamental theoretical methods to the latest innovative computational imaging system designs. Topics of interest will include advanced algorithms and mathematical techniques, model-based data inversion, methods for image and signal recovery from sparse and incomplete data, techniques for non-traditional sensing of image data, methods for dynamic information acquisition and extraction from imaging sensors, software and hardware for efficient computation in imaging systems, and highly novel imaging system design.
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