{"title":"封闭在巨型单拉美米尔囊泡中的细菌的曲率动力学","authors":"Olivia Vincent, Aparna Sreekumari, Manoj Gopalakrishnan, Vishwas V Vasisht, Bibhu Ranjan Sarangi","doi":"arxiv-2409.03578","DOIUrl":null,"url":null,"abstract":"We investigate the positional behavior of a single bacterium confined within\na vesicle by measuring the probability of locating the bacterium at a certain\ndistance from the vesicle boundary. We observe that the distribution is\nbi-exponential in nature. Near the boundary, the distribution exhibits rapid\nexponential decay, transitioning to a slower exponential decay, and eventually\nbecoming uniform further away from the boundary. The length scales associated\nwith the decay are found to depend on the confinement radius. We interpret\nthese observations using molecular simulations and analytical calculations\nbased on the Fokker-Planck equation for an Active Brownian Particle model. Our\nfindings reveal that the small length scale is strongly influenced by the\ntranslational diffusion coefficient, while the larger length scale is governed\nby rotational diffusivity and self-propulsion. These results are explained in\nterms of two dimensionless parameters that explicitly include the confinement\nradius. The scaling behavior predicted analytically for the observed length\nscales is confirmed through simulations.","PeriodicalId":501146,"journal":{"name":"arXiv - PHYS - Soft Condensed Matter","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Curvature dependent dynamics of a bacterium confined in a giant unilamellar vesicle\",\"authors\":\"Olivia Vincent, Aparna Sreekumari, Manoj Gopalakrishnan, Vishwas V Vasisht, Bibhu Ranjan Sarangi\",\"doi\":\"arxiv-2409.03578\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"We investigate the positional behavior of a single bacterium confined within\\na vesicle by measuring the probability of locating the bacterium at a certain\\ndistance from the vesicle boundary. We observe that the distribution is\\nbi-exponential in nature. Near the boundary, the distribution exhibits rapid\\nexponential decay, transitioning to a slower exponential decay, and eventually\\nbecoming uniform further away from the boundary. The length scales associated\\nwith the decay are found to depend on the confinement radius. We interpret\\nthese observations using molecular simulations and analytical calculations\\nbased on the Fokker-Planck equation for an Active Brownian Particle model. Our\\nfindings reveal that the small length scale is strongly influenced by the\\ntranslational diffusion coefficient, while the larger length scale is governed\\nby rotational diffusivity and self-propulsion. These results are explained in\\nterms of two dimensionless parameters that explicitly include the confinement\\nradius. The scaling behavior predicted analytically for the observed length\\nscales is confirmed through simulations.\",\"PeriodicalId\":501146,\"journal\":{\"name\":\"arXiv - PHYS - Soft Condensed Matter\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-09-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - PHYS - Soft Condensed Matter\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2409.03578\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - PHYS - Soft Condensed Matter","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2409.03578","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Curvature dependent dynamics of a bacterium confined in a giant unilamellar vesicle
We investigate the positional behavior of a single bacterium confined within
a vesicle by measuring the probability of locating the bacterium at a certain
distance from the vesicle boundary. We observe that the distribution is
bi-exponential in nature. Near the boundary, the distribution exhibits rapid
exponential decay, transitioning to a slower exponential decay, and eventually
becoming uniform further away from the boundary. The length scales associated
with the decay are found to depend on the confinement radius. We interpret
these observations using molecular simulations and analytical calculations
based on the Fokker-Planck equation for an Active Brownian Particle model. Our
findings reveal that the small length scale is strongly influenced by the
translational diffusion coefficient, while the larger length scale is governed
by rotational diffusivity and self-propulsion. These results are explained in
terms of two dimensionless parameters that explicitly include the confinement
radius. The scaling behavior predicted analytically for the observed length
scales is confirmed through simulations.