{"title":"用柳维尔量子主方程计算生物电导","authors":"Eszter Papp, Gabor Vattay","doi":"arxiv-2408.08017","DOIUrl":null,"url":null,"abstract":"Recent experiments have revealed that single proteins can display high\nconductivity, which stays finite for low temperatures, decays slowly with\ndistance, and exhibits a rich spatial structure featuring highly conducting and\nstrongly insulating domains. Here, we intruduce a new formula by combining the\ndensity matrix of the Liouville-Master Equation simulating quantum transport in\nnanoscale devices, and the phenomenological model of electronic conductance\nthrough molecules, that can account for the observed distance- and temperature\ndependence of conductance in proteins. We demonstrate its efficacy on\nexperimentally highly conductive extracellular cytochrome nanowires, which are\ngood candidates to illustrate our new approach by calculating and visualizing\ntheir electronic wiring, given the interest in the arrangement of their\nconducting and insulating parts. As proteins and protein nanowires exhibit\nsignificant potential for diverse applications, including energy production and\nsensing, our computational technique can accelerate the design of\nnano-bioelectronic devices.","PeriodicalId":501022,"journal":{"name":"arXiv - QuanBio - Biomolecules","volume":"33 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-08-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Computation of Biological Conductance with Liouville Quantum Master Equation\",\"authors\":\"Eszter Papp, Gabor Vattay\",\"doi\":\"arxiv-2408.08017\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Recent experiments have revealed that single proteins can display high\\nconductivity, which stays finite for low temperatures, decays slowly with\\ndistance, and exhibits a rich spatial structure featuring highly conducting and\\nstrongly insulating domains. Here, we intruduce a new formula by combining the\\ndensity matrix of the Liouville-Master Equation simulating quantum transport in\\nnanoscale devices, and the phenomenological model of electronic conductance\\nthrough molecules, that can account for the observed distance- and temperature\\ndependence of conductance in proteins. We demonstrate its efficacy on\\nexperimentally highly conductive extracellular cytochrome nanowires, which are\\ngood candidates to illustrate our new approach by calculating and visualizing\\ntheir electronic wiring, given the interest in the arrangement of their\\nconducting and insulating parts. As proteins and protein nanowires exhibit\\nsignificant potential for diverse applications, including energy production and\\nsensing, our computational technique can accelerate the design of\\nnano-bioelectronic devices.\",\"PeriodicalId\":501022,\"journal\":{\"name\":\"arXiv - QuanBio - Biomolecules\",\"volume\":\"33 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-08-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - QuanBio - Biomolecules\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2408.08017\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Biomolecules","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2408.08017","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Computation of Biological Conductance with Liouville Quantum Master Equation
Recent experiments have revealed that single proteins can display high
conductivity, which stays finite for low temperatures, decays slowly with
distance, and exhibits a rich spatial structure featuring highly conducting and
strongly insulating domains. Here, we intruduce a new formula by combining the
density matrix of the Liouville-Master Equation simulating quantum transport in
nanoscale devices, and the phenomenological model of electronic conductance
through molecules, that can account for the observed distance- and temperature
dependence of conductance in proteins. We demonstrate its efficacy on
experimentally highly conductive extracellular cytochrome nanowires, which are
good candidates to illustrate our new approach by calculating and visualizing
their electronic wiring, given the interest in the arrangement of their
conducting and insulating parts. As proteins and protein nanowires exhibit
significant potential for diverse applications, including energy production and
sensing, our computational technique can accelerate the design of
nano-bioelectronic devices.