Zhaorui Liu, Hao Chen, Caiyin Tang, Quan Li, Tao Peng
{"title":"利用深度并行挤压和激励以及关注 Unet 自动进行淋巴结分割","authors":"Zhaorui Liu, Hao Chen, Caiyin Tang, Quan Li, Tao Peng","doi":"10.1007/s00530-024-01465-y","DOIUrl":null,"url":null,"abstract":"<p>Automatic segmentation and lymph node (LN) detection for cancer staging are critical. In clinical practice, computed tomography (CT) and positron emission tomography (PET) imaging detect abnormal LNs. Yet, it is still a difficult task due to the low contrast of LNs and surrounding soft tissues and the variation in nodal size and shape. We designed a location-guided 3D dual network for LN segmentation. A localization module generates Gaussian masks focused on LNs centralized within selected regions of interest (ROI). Our segmentation model incorporated squeeze & excitation (SE) and attention gate (AG) modules into a conventional 3D UNet architecture to boost useful feature utilization and increase usable feature utilization and segmentation accuracy. Lastly, we provide a simple boundary refinement module to polish the outcomes. We assessed the location-guided LN segmentation network’s performance on a clinical dataset with head and neck cancer. The location-guided network outperformed a comparable architecture without the Gaussian mask in terms of performance.</p>","PeriodicalId":3,"journal":{"name":"ACS Applied Electronic Materials","volume":null,"pages":null},"PeriodicalIF":4.3000,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Automatic lymph node segmentation using deep parallel squeeze & excitation and attention Unet\",\"authors\":\"Zhaorui Liu, Hao Chen, Caiyin Tang, Quan Li, Tao Peng\",\"doi\":\"10.1007/s00530-024-01465-y\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Automatic segmentation and lymph node (LN) detection for cancer staging are critical. In clinical practice, computed tomography (CT) and positron emission tomography (PET) imaging detect abnormal LNs. Yet, it is still a difficult task due to the low contrast of LNs and surrounding soft tissues and the variation in nodal size and shape. We designed a location-guided 3D dual network for LN segmentation. A localization module generates Gaussian masks focused on LNs centralized within selected regions of interest (ROI). Our segmentation model incorporated squeeze & excitation (SE) and attention gate (AG) modules into a conventional 3D UNet architecture to boost useful feature utilization and increase usable feature utilization and segmentation accuracy. Lastly, we provide a simple boundary refinement module to polish the outcomes. We assessed the location-guided LN segmentation network’s performance on a clinical dataset with head and neck cancer. The location-guided network outperformed a comparable architecture without the Gaussian mask in terms of performance.</p>\",\"PeriodicalId\":3,\"journal\":{\"name\":\"ACS Applied Electronic Materials\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2024-09-13\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Applied Electronic Materials\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://doi.org/10.1007/s00530-024-01465-y\",\"RegionNum\":3,\"RegionCategory\":\"材料科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, ELECTRICAL & ELECTRONIC\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Electronic Materials","FirstCategoryId":"94","ListUrlMain":"https://doi.org/10.1007/s00530-024-01465-y","RegionNum":3,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
Automatic lymph node segmentation using deep parallel squeeze & excitation and attention Unet
Automatic segmentation and lymph node (LN) detection for cancer staging are critical. In clinical practice, computed tomography (CT) and positron emission tomography (PET) imaging detect abnormal LNs. Yet, it is still a difficult task due to the low contrast of LNs and surrounding soft tissues and the variation in nodal size and shape. We designed a location-guided 3D dual network for LN segmentation. A localization module generates Gaussian masks focused on LNs centralized within selected regions of interest (ROI). Our segmentation model incorporated squeeze & excitation (SE) and attention gate (AG) modules into a conventional 3D UNet architecture to boost useful feature utilization and increase usable feature utilization and segmentation accuracy. Lastly, we provide a simple boundary refinement module to polish the outcomes. We assessed the location-guided LN segmentation network’s performance on a clinical dataset with head and neck cancer. The location-guided network outperformed a comparable architecture without the Gaussian mask in terms of performance.