为基于深度学习的核磁共振化学位移预测建立统一基准和框架

Fanjie Xu, Wentao Guo, Feng Wang, Lin Yao, Hongshuai Wang, Fujie Tang, Zhifeng Gao, Linfeng Zhang, Weinan E, Zhong-Qun Tian, Jun Cheng
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引用次数: 0

摘要

由于分子结构关系复杂,从分子结构预测光谱具有挑战性。在此,我们介绍一种深度学习框架 NMRNet,它采用 SE(3) Transformer 进行原子环境建模,并遵循预训练和微调范式。为了支持核磁共振化学位移预测模型的评估,我们在以往研究和数据库的基础上建立了一个全面的基准,涵盖了多种化学体系。将 NMRNet 应用于这些基准数据集,我们在液态和固态核磁共振数据集上都取得了最先进的性能,证明了它在真实世界场景中的鲁棒性和实用性。这标志着在统一的模型架构中首次集成了固态和液态 NMR,凸显了特定领域处理不同原子环境的必要性。我们的工作为 NMR 预测设定了新标准,推动了分析和结构化学中的深度学习应用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Towards a Unified Benchmark and Framework for Deep Learning-Based Prediction of Nuclear Magnetic Resonance Chemical Shifts
The study of structure-spectrum relationships is essential for spectral interpretation, impacting structural elucidation and material design. Predicting spectra from molecular structures is challenging due to their complex relationships. Herein, we introduce NMRNet, a deep learning framework using the SE(3) Transformer for atomic environment modeling, following a pre-training and fine-tuning paradigm. To support the evaluation of NMR chemical shift prediction models, we have established a comprehensive benchmark based on previous research and databases, covering diverse chemical systems. Applying NMRNet to these benchmark datasets, we achieve state-of-the-art performance in both liquid-state and solid-state NMR datasets, demonstrating its robustness and practical utility in real-world scenarios. This marks the first integration of solid and liquid state NMR within a unified model architecture, highlighting the need for domainspecific handling of different atomic environments. Our work sets a new standard for NMR prediction, advancing deep learning applications in analytical and structural chemistry.
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