{"title":"基于线粒体 COI 序列的 Astylus atromaculatus Blanchard, 1843 (Coleoptera: Melyridae) 分子鉴定和初步多样性分析","authors":"Joel Demián Arneodo, Cecilia Decker-Franco","doi":"10.1007/s12600-024-01195-x","DOIUrl":null,"url":null,"abstract":"<p><i>Astylus atromaculatus</i> Blanchard, 1843 (Coleoptera: Melyridae) is a pollinivorous beetle native to southern South America, which has invaded South Africa more than a century ago. Adults and/or larvae may occasionally damage flowers, seeds, and seedlings of various crops. Severe cattle intoxication has also been reported in Argentina, Uruguay, and South Africa following consumption of alfalfa and forage grasses infested with <i>A. atromaculatus</i>. Despite its economic impact, essential genetic information is lacking for this species. The present paper provides the first DNA barcode reference sequences for <i>A. atromaculatus</i> based on the standard 5’ fragment (658 bp) of the cytochrome c oxidase subunit I gene. The sequences obtained exhibited pairwise distances of ≤ 1.82% among them, and ~ 90% nucleotide identity with the homologous gene fragment in the morphologically similar <i>Astylus variegatus</i> Germar, 1824. The use of this molecular marker to explore the intraspecific variability of <i>A. atromaculatus</i> in central Argentina showed 21 different haplotypes, out of 32 individuals analyzed. A very high haplotype diversity (H<sub>d</sub> = 0.962 ± 0.019) and a moderate nucleotide diversity (π = 0.00778 ± 0.00079) were recorded. The haplotype network displayed a diffuse structure due to the abundance of singletons and possible missing haplotypes, with the most common haplotype comprising only 15.6% of the specimens collected. Future research with increased sampling size and geographic coverage will allow for a better understanding of the population genetics of this pest, and consequently, for developing efficient management practices.</p>","PeriodicalId":20220,"journal":{"name":"Phytoparasitica","volume":"15 1","pages":""},"PeriodicalIF":1.5000,"publicationDate":"2024-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Molecular identification and preliminary diversity analysis of Astylus atromaculatus Blanchard, 1843 (Coleoptera: Melyridae) based on mitochondrial COI sequences\",\"authors\":\"Joel Demián Arneodo, Cecilia Decker-Franco\",\"doi\":\"10.1007/s12600-024-01195-x\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><i>Astylus atromaculatus</i> Blanchard, 1843 (Coleoptera: Melyridae) is a pollinivorous beetle native to southern South America, which has invaded South Africa more than a century ago. Adults and/or larvae may occasionally damage flowers, seeds, and seedlings of various crops. Severe cattle intoxication has also been reported in Argentina, Uruguay, and South Africa following consumption of alfalfa and forage grasses infested with <i>A. atromaculatus</i>. Despite its economic impact, essential genetic information is lacking for this species. The present paper provides the first DNA barcode reference sequences for <i>A. atromaculatus</i> based on the standard 5’ fragment (658 bp) of the cytochrome c oxidase subunit I gene. The sequences obtained exhibited pairwise distances of ≤ 1.82% among them, and ~ 90% nucleotide identity with the homologous gene fragment in the morphologically similar <i>Astylus variegatus</i> Germar, 1824. The use of this molecular marker to explore the intraspecific variability of <i>A. atromaculatus</i> in central Argentina showed 21 different haplotypes, out of 32 individuals analyzed. A very high haplotype diversity (H<sub>d</sub> = 0.962 ± 0.019) and a moderate nucleotide diversity (π = 0.00778 ± 0.00079) were recorded. The haplotype network displayed a diffuse structure due to the abundance of singletons and possible missing haplotypes, with the most common haplotype comprising only 15.6% of the specimens collected. Future research with increased sampling size and geographic coverage will allow for a better understanding of the population genetics of this pest, and consequently, for developing efficient management practices.</p>\",\"PeriodicalId\":20220,\"journal\":{\"name\":\"Phytoparasitica\",\"volume\":\"15 1\",\"pages\":\"\"},\"PeriodicalIF\":1.5000,\"publicationDate\":\"2024-09-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Phytoparasitica\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s12600-024-01195-x\",\"RegionNum\":3,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"AGRONOMY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Phytoparasitica","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s12600-024-01195-x","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"AGRONOMY","Score":null,"Total":0}
引用次数: 0
摘要
Astylus atromaculatus Blanchard, 1843 (Coleoptera: Melyridae) 是一种原产于南美洲南部的食粉甲虫,一个多世纪前入侵南非。成虫和/或幼虫偶尔会损害各种作物的花、种子和幼苗。在阿根廷、乌拉圭和南非,也有报道称牛食用了受 A. atromaculatus 侵染的紫花苜蓿和牧草后出现严重中毒。尽管该物种对经济有影响,但仍缺乏重要的遗传信息。本文基于细胞色素 c 氧化酶亚单位 I 基因的标准 5' 片段(658 bp),首次提供了 A. atromaculatus 的 DNA 条形码参考序列。所获得的序列之间的成对距离≤1.82%,与形态相似的Astylus variegatus Germar, 1824的同源基因片段的核苷酸同一性约为90%。利用该分子标记探索阿根廷中部A. atromaculatus的种内变异,在分析的32个个体中发现了21种不同的单倍型。单倍型多样性极高(Hd = 0.962 ± 0.019),核苷酸多样性适中(π = 0.00778 ± 0.00079)。由于存在大量单倍型和可能缺失的单倍型,单倍型网络显示出分散的结构,最常见的单倍型仅占采集标本的 15.6%。未来的研究将扩大采样规模和地理覆盖范围,从而更好地了解这种害虫的种群遗传学,进而制定有效的管理措施。
Molecular identification and preliminary diversity analysis of Astylus atromaculatus Blanchard, 1843 (Coleoptera: Melyridae) based on mitochondrial COI sequences
Astylus atromaculatus Blanchard, 1843 (Coleoptera: Melyridae) is a pollinivorous beetle native to southern South America, which has invaded South Africa more than a century ago. Adults and/or larvae may occasionally damage flowers, seeds, and seedlings of various crops. Severe cattle intoxication has also been reported in Argentina, Uruguay, and South Africa following consumption of alfalfa and forage grasses infested with A. atromaculatus. Despite its economic impact, essential genetic information is lacking for this species. The present paper provides the first DNA barcode reference sequences for A. atromaculatus based on the standard 5’ fragment (658 bp) of the cytochrome c oxidase subunit I gene. The sequences obtained exhibited pairwise distances of ≤ 1.82% among them, and ~ 90% nucleotide identity with the homologous gene fragment in the morphologically similar Astylus variegatus Germar, 1824. The use of this molecular marker to explore the intraspecific variability of A. atromaculatus in central Argentina showed 21 different haplotypes, out of 32 individuals analyzed. A very high haplotype diversity (Hd = 0.962 ± 0.019) and a moderate nucleotide diversity (π = 0.00778 ± 0.00079) were recorded. The haplotype network displayed a diffuse structure due to the abundance of singletons and possible missing haplotypes, with the most common haplotype comprising only 15.6% of the specimens collected. Future research with increased sampling size and geographic coverage will allow for a better understanding of the population genetics of this pest, and consequently, for developing efficient management practices.
期刊介绍:
Phytoparasitica is an international journal on Plant Protection, that publishes original research contributions on the biological, chemical and molecular aspects of Entomology, Plant Pathology, Virology, Nematology, and Weed Sciences, which strives to improve scientific knowledge and technology for IPM, in forest and agroecosystems. Phytoparasitica emphasizes new insights into plant disease and pest etiology, epidemiology, host-parasite/pest biochemistry and cell biology, ecology and population biology, host genetics and resistance, disease vector biology, plant stress and biotic disorders, postharvest pathology and mycotoxins. Research can cover aspects related to the nature of plant diseases, pests and weeds, the causal agents, their spread, the losses they cause, crop loss assessment, and novel tactics and approaches for their management.