{"title":"使用具有恒定误差和灵活压缩率的深度卷积自动编码器压缩心电图信号","authors":"","doi":"10.1016/j.irbm.2024.100859","DOIUrl":null,"url":null,"abstract":"<div><p><strong>Objectives</strong></p><p>Electrocardiogram (ECG) signals are beneficial for diagnosing cardiac diseases. The cardiac patients' life quality likely increases with continuous or long-period recording and monitoring of ECG signals, leading to better and early diagnosis of disease and heart attacks. However, continuous ECG recording necessitates high data rates and storage, which means high costs. Therefore, ECG compression is a handy concept that facilitates continuous monitoring of ECG signals. Deep neural networks open up new horizons for compression and also for ECG compression by providing high compression rates and quality. Although they bring constant compression ratios with better average quality, the compression quality of individual samples is not guaranteed, which may lead to misdiagnoses. This study aims to investigate the effect of compression quality on the diagnoses and to develop a deep neural network-based compression strategy that guarantees a quality-bound in return for varying compression ratios.</p><p><strong>Materials and methods</strong></p><p>The effect of the compression quality on the arrhythmia diagnoses is tested by comparing the performance of the deep learning-based ECG classifier on the original ECG recordings and the distorted recordings using a lossy compression algorithm with different compression error levels. Then, a compression error upper limit is calculated in terms of normalized percent root mean square difference (PRDN) error, which also coincides with the findings of the previous studies in the literature. Lastly, to enable deep learning in ECG compression, a single encoder-multi-decoder convolutional autoencoder architecture, and multiple quantization levels are proposed to guarantee a desired upper limit on the error rate.</p><p><strong>Results</strong></p><p>The efficiency of the proposed method is demonstrated on a popular benchmark data set for ECG compression methods using a transfer learning approach. The PRDN error is fixed to various values, and the average compression rates are reported. An average of <span><math><mn>13.019</mn><mo>:</mo><mn>1</mn></math></span> compression is achieved for a 10% PRDN error rate, assessed as a fair quality threshold for reconstruction error. It has also been shown that the compression model has a runtime that can be run in real-time on wearable devices such as commercial smartwatches.</p><p><strong>Conclusion</strong></p><p>This study proposes a deep learning-based ECG compression algorithm that guarantees a desired upper limit on the compression error. This model may facilitate an eHealth solution for continuous monitoring of ECG signals of individuals, especially cardiac patients.</p></div>","PeriodicalId":14605,"journal":{"name":"Irbm","volume":null,"pages":null},"PeriodicalIF":5.6000,"publicationDate":"2024-09-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Electrocardiogram Signal Compression Using Deep Convolutional Autoencoder with Constant Error and Flexible Compression Rate\",\"authors\":\"\",\"doi\":\"10.1016/j.irbm.2024.100859\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p><strong>Objectives</strong></p><p>Electrocardiogram (ECG) signals are beneficial for diagnosing cardiac diseases. The cardiac patients' life quality likely increases with continuous or long-period recording and monitoring of ECG signals, leading to better and early diagnosis of disease and heart attacks. However, continuous ECG recording necessitates high data rates and storage, which means high costs. Therefore, ECG compression is a handy concept that facilitates continuous monitoring of ECG signals. Deep neural networks open up new horizons for compression and also for ECG compression by providing high compression rates and quality. Although they bring constant compression ratios with better average quality, the compression quality of individual samples is not guaranteed, which may lead to misdiagnoses. This study aims to investigate the effect of compression quality on the diagnoses and to develop a deep neural network-based compression strategy that guarantees a quality-bound in return for varying compression ratios.</p><p><strong>Materials and methods</strong></p><p>The effect of the compression quality on the arrhythmia diagnoses is tested by comparing the performance of the deep learning-based ECG classifier on the original ECG recordings and the distorted recordings using a lossy compression algorithm with different compression error levels. Then, a compression error upper limit is calculated in terms of normalized percent root mean square difference (PRDN) error, which also coincides with the findings of the previous studies in the literature. Lastly, to enable deep learning in ECG compression, a single encoder-multi-decoder convolutional autoencoder architecture, and multiple quantization levels are proposed to guarantee a desired upper limit on the error rate.</p><p><strong>Results</strong></p><p>The efficiency of the proposed method is demonstrated on a popular benchmark data set for ECG compression methods using a transfer learning approach. The PRDN error is fixed to various values, and the average compression rates are reported. An average of <span><math><mn>13.019</mn><mo>:</mo><mn>1</mn></math></span> compression is achieved for a 10% PRDN error rate, assessed as a fair quality threshold for reconstruction error. It has also been shown that the compression model has a runtime that can be run in real-time on wearable devices such as commercial smartwatches.</p><p><strong>Conclusion</strong></p><p>This study proposes a deep learning-based ECG compression algorithm that guarantees a desired upper limit on the compression error. This model may facilitate an eHealth solution for continuous monitoring of ECG signals of individuals, especially cardiac patients.</p></div>\",\"PeriodicalId\":14605,\"journal\":{\"name\":\"Irbm\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":5.6000,\"publicationDate\":\"2024-09-06\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Irbm\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S195903182400040X\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Irbm","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S195903182400040X","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
Electrocardiogram Signal Compression Using Deep Convolutional Autoencoder with Constant Error and Flexible Compression Rate
Objectives
Electrocardiogram (ECG) signals are beneficial for diagnosing cardiac diseases. The cardiac patients' life quality likely increases with continuous or long-period recording and monitoring of ECG signals, leading to better and early diagnosis of disease and heart attacks. However, continuous ECG recording necessitates high data rates and storage, which means high costs. Therefore, ECG compression is a handy concept that facilitates continuous monitoring of ECG signals. Deep neural networks open up new horizons for compression and also for ECG compression by providing high compression rates and quality. Although they bring constant compression ratios with better average quality, the compression quality of individual samples is not guaranteed, which may lead to misdiagnoses. This study aims to investigate the effect of compression quality on the diagnoses and to develop a deep neural network-based compression strategy that guarantees a quality-bound in return for varying compression ratios.
Materials and methods
The effect of the compression quality on the arrhythmia diagnoses is tested by comparing the performance of the deep learning-based ECG classifier on the original ECG recordings and the distorted recordings using a lossy compression algorithm with different compression error levels. Then, a compression error upper limit is calculated in terms of normalized percent root mean square difference (PRDN) error, which also coincides with the findings of the previous studies in the literature. Lastly, to enable deep learning in ECG compression, a single encoder-multi-decoder convolutional autoencoder architecture, and multiple quantization levels are proposed to guarantee a desired upper limit on the error rate.
Results
The efficiency of the proposed method is demonstrated on a popular benchmark data set for ECG compression methods using a transfer learning approach. The PRDN error is fixed to various values, and the average compression rates are reported. An average of compression is achieved for a 10% PRDN error rate, assessed as a fair quality threshold for reconstruction error. It has also been shown that the compression model has a runtime that can be run in real-time on wearable devices such as commercial smartwatches.
Conclusion
This study proposes a deep learning-based ECG compression algorithm that guarantees a desired upper limit on the compression error. This model may facilitate an eHealth solution for continuous monitoring of ECG signals of individuals, especially cardiac patients.
期刊介绍:
IRBM is the journal of the AGBM (Alliance for engineering in Biology an Medicine / Alliance pour le génie biologique et médical) and the SFGBM (BioMedical Engineering French Society / Société française de génie biologique médical) and the AFIB (French Association of Biomedical Engineers / Association française des ingénieurs biomédicaux).
As a vehicle of information and knowledge in the field of biomedical technologies, IRBM is devoted to fundamental as well as clinical research. Biomedical engineering and use of new technologies are the cornerstones of IRBM, providing authors and users with the latest information. Its six issues per year propose reviews (state-of-the-art and current knowledge), original articles directed at fundamental research and articles focusing on biomedical engineering. All articles are submitted to peer reviewers acting as guarantors for IRBM''s scientific and medical content. The field covered by IRBM includes all the discipline of Biomedical engineering. Thereby, the type of papers published include those that cover the technological and methodological development in:
-Physiological and Biological Signal processing (EEG, MEG, ECG…)-
Medical Image processing-
Biomechanics-
Biomaterials-
Medical Physics-
Biophysics-
Physiological and Biological Sensors-
Information technologies in healthcare-
Disability research-
Computational physiology-
…