染色质凝聚体的 ATP 依赖性重塑揭示了两种重塑因子的不同中尺度效应

Camille Marie Moore, Upneet Kaur, Emily Wong, Un Seng Marie Chio, Ziling Zhou, Megan Ostrowski, Ke Wu, Iryna Irkliyenko, Sean Wang, Vijay Ramani, Geeta Narlikar
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引用次数: 0

摘要

依赖于 ATP 的染色质重塑酶能调动核小体,但这种调动如何影响染色质凝聚尚不清楚。在这里,我们利用染色质凝集物和单分子足迹分析研究了两种主要重塑酶 ACF 和 RSC 的影响。我们发现这两种重塑因子都会抑制染色质凝聚的形成。不过,这两种重塑因子对已形成的染色质凝聚体有不同的影响。ACF 可使核小体空间化,而不会使染色质凝结,这就解释了 ACF 如何在转录抑制的基因组区域维持核小体组织。与此相反,RSC 可催化依赖 ATP 的染色质去凝结。令人惊讶的是,RSC 还能驱动整个凝集物的微米级运动。这些新发现的 RSC 活动解释了它在转录激活中的核心作用。因此,重塑者的生物学重要性可能既反映了它们对核小体动员的影响,也反映了它们在中观尺度上对染色质动力学的相应影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
ATP-dependent remodeling of chromatin condensates uncovers distinct mesoscale effects of two remodelers
ATP-dependent chromatin remodeling enzymes mobilize nucleosomes, but how such mobilization affects chromatin condensation is unclear. Here, we investigate effects of two major remodelers, ACF and RSC using chromatin condensates and single-molecule footprinting. We find that both remodelers inhibit the formation of condensed chromatin. However, the remodelers have distinct effects on pre-formed chromatin condensates. ACF spaces nucleosomes without de-condensing the chromatin, explaining how ACF maintains nucleosome organization in transcriptionally repressed genomic regions. In contrast, RSC catalyzes ATP-dependent de-condensation of chromatin. Surprisingly, RSC also drives micron-scale movements of entire condensates. These newly uncovered activities of RSC explain its central role in transcriptional activation. The biological importance of remodelers may thus reflect both their effects on nucleosome mobilization and the corresponding consequences on chromatin dynamics at the mesoscale.
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