贝叶斯聚类有效性指数

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Onthada Preedasawakul , Nathakhun Wiroonsri
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引用次数: 0

摘要

选择合适的聚类数量是应用聚类算法的关键一步。为了协助这一过程,人们开发了各种聚类有效性指数(CVI)。这些指数旨在确定数据集中的最佳聚类数量。然而,用户可能并不总是寻求绝对的最佳聚类数量,而是寻求更符合其特定应用的次要选项。这种认识促使我们在现有指数的基础上引入了贝叶斯聚类有效性指数(BCVI)。BCVI 采用 Dirichlet 或广义 Dirichlet 前验,产生相同的后验分布。使用 Calinski-Harabasz、CVNN、Davies-Bouldin、silhouette、Starczewski 和 Wiroonsri 指数作为硬聚类的基础指数,使用 KWON2、Wiroonsri-Preedasawakul 和 Xie-Beni 指数作为软聚类的基础指数,对提出的 BCVI 进行了评估。比较了提议的 BCVI 与原始基础指数的性能。BCVI 在用户专业知识非常宝贵的情况下具有明显的优势,允许用户指定其所需的最终聚类数量范围。为了说明这一点,我们进行了三种不同情况的实验。此外,还介绍了通过真实世界数据集(如核磁共振成像脑肿瘤图像)提出的方法的实际应用性。这些工具已作为最新的 R 软件包 "BayesCVI "发布。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A Bayesian cluster validity index

Selecting the appropriate number of clusters is a critical step in applying clustering algorithms. To assist in this process, various cluster validity indices (CVIs) have been developed. These indices are designed to identify the optimal number of clusters within a dataset. However, users may not always seek the absolute optimal number of clusters but rather a secondary option that better aligns with their specific applications. This realization has led us to introduce a Bayesian cluster validity index (BCVI), which builds upon existing indices. The BCVI utilizes either Dirichlet or generalized Dirichlet priors, resulting in the same posterior distribution. The proposed BCVI is evaluated using the Calinski-Harabasz, CVNN, Davies–Bouldin, silhouette, Starczewski, and Wiroonsri indices for hard clustering and the KWON2, Wiroonsri–Preedasawakul, and Xie–Beni indices for soft clustering as underlying indices. The performance of the proposed BCVI with that of the original underlying indices has been compared. The BCVI offers clear advantages in situations where user expertise is valuable, allowing users to specify their desired range for the final number of clusters. To illustrate this, experiments classified into three different scenarios are conducted. Additionally, the practical applicability of the proposed approach through real-world datasets, such as MRI brain tumor images are presented. These tools are published as a recent R package ‘BayesCVI’.

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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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