{"title":"探索 tau 蛋白和淀粉样蛋白-β 的传播:基于生物数据的数学模型敏感性分析","authors":"Mattia Corti","doi":"10.1016/j.brain.2024.100098","DOIUrl":null,"url":null,"abstract":"<div><p>Alzheimer’s disease is the most common dementia worldwide. Its pathological development is well known to be connected with the accumulation of two toxic proteins: tau protein and amyloid-<span><math><mi>β</mi></math></span>. Mathematical models and numerical simulations can predict the spreading patterns of misfolded proteins in this context. However, the calibration of the model parameters plays a crucial role in the final solution. In this work, we perform a sensitivity analysis of heterodimer and Fisher–Kolmogorov models to evaluate the impact of the equilibrium values of protein concentration on the solution patterns. We adopt advanced numerical methods such as the IMEX-DG method to accurately describe the propagating fronts in the propagation phenomena in a polygonal mesh of sagittal patient-specific brain geometry derived from magnetic resonance images. We calibrate the model parameters using biological measurements in the brain cortex for the tau protein and the amyloid-<span><math><mi>β</mi></math></span> in Alzheimer’s patients and controls. Finally, using the sensitivity analysis results, we discuss the applicability of both models in the correct simulation of the spreading of the two proteins.</p><p><strong>Statement of significance:</strong> Alzheimer’s disease is related to the accumulation of tau protein and amyloid-<span><math><mi>β</mi></math></span>. Mathematical models to predict the spreading patterns require accurate parameter calibration. In this work, we perform a sensitivity analysis of heterodimer and Fisher–Kolmogorov models to evaluate the impact of the equilibrium values of protein concentration on the solution patterns obtained with advanced numerical simulations on patient-specific brain geometry derived from magnetic resonance images. By using biological measurements in the brain cortex for the proteins in Alzheimer’s patients and controls, we use sensitivity analysis to discuss the applicability of models in simulating protein spreading.</p></div>","PeriodicalId":72449,"journal":{"name":"Brain multiphysics","volume":"7 ","pages":"Article 100098"},"PeriodicalIF":0.0000,"publicationDate":"2024-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2666522024000091/pdfft?md5=aeceabaf3cdacef18e0177333e021da0&pid=1-s2.0-S2666522024000091-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Exploring tau protein and amyloid-beta propagation: A sensitivity analysis of mathematical models based on biological data\",\"authors\":\"Mattia Corti\",\"doi\":\"10.1016/j.brain.2024.100098\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Alzheimer’s disease is the most common dementia worldwide. Its pathological development is well known to be connected with the accumulation of two toxic proteins: tau protein and amyloid-<span><math><mi>β</mi></math></span>. Mathematical models and numerical simulations can predict the spreading patterns of misfolded proteins in this context. However, the calibration of the model parameters plays a crucial role in the final solution. In this work, we perform a sensitivity analysis of heterodimer and Fisher–Kolmogorov models to evaluate the impact of the equilibrium values of protein concentration on the solution patterns. We adopt advanced numerical methods such as the IMEX-DG method to accurately describe the propagating fronts in the propagation phenomena in a polygonal mesh of sagittal patient-specific brain geometry derived from magnetic resonance images. We calibrate the model parameters using biological measurements in the brain cortex for the tau protein and the amyloid-<span><math><mi>β</mi></math></span> in Alzheimer’s patients and controls. Finally, using the sensitivity analysis results, we discuss the applicability of both models in the correct simulation of the spreading of the two proteins.</p><p><strong>Statement of significance:</strong> Alzheimer’s disease is related to the accumulation of tau protein and amyloid-<span><math><mi>β</mi></math></span>. Mathematical models to predict the spreading patterns require accurate parameter calibration. In this work, we perform a sensitivity analysis of heterodimer and Fisher–Kolmogorov models to evaluate the impact of the equilibrium values of protein concentration on the solution patterns obtained with advanced numerical simulations on patient-specific brain geometry derived from magnetic resonance images. By using biological measurements in the brain cortex for the proteins in Alzheimer’s patients and controls, we use sensitivity analysis to discuss the applicability of models in simulating protein spreading.</p></div>\",\"PeriodicalId\":72449,\"journal\":{\"name\":\"Brain multiphysics\",\"volume\":\"7 \",\"pages\":\"Article 100098\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-08-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S2666522024000091/pdfft?md5=aeceabaf3cdacef18e0177333e021da0&pid=1-s2.0-S2666522024000091-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Brain multiphysics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2666522024000091\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"Engineering\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Brain multiphysics","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2666522024000091","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Engineering","Score":null,"Total":0}
引用次数: 0
摘要
阿尔茨海默病是全球最常见的痴呆症。众所周知,其病理发展与两种有毒蛋白质的积累有关:tau 蛋白和淀粉样蛋白-β。在这种情况下,数学模型和数值模拟可以预测错误折叠蛋白的扩散模式。然而,模型参数的校准对最终解决方案起着至关重要的作用。在这项工作中,我们对异源二聚体模型和 Fisher-Kolmogorov 模型进行了敏感性分析,以评估蛋白质浓度平衡值对溶液模式的影响。我们采用先进的数值方法(如 IMEX-DG 方法),在根据磁共振图像得出的矢状患者特定脑几何形状的多边形网格中精确描述传播现象中的传播前沿。我们利用对阿尔茨海默氏症患者和对照组大脑皮层中 tau 蛋白和淀粉样蛋白-β 的生物测量结果来校准模型参数。最后,我们利用敏感性分析结果,讨论了两种模型在正确模拟两种蛋白质扩散方面的适用性:阿尔茨海默病与 tau 蛋白和淀粉样蛋白-β 的积累有关。预测扩散模式的数学模型需要精确的参数校准。在这项工作中,我们对异源二聚体模型和费舍尔-科尔莫哥罗夫模型进行了敏感性分析,以评估蛋白质浓度平衡值对根据磁共振图像得出的患者特定大脑几何形状进行高级数值模拟所获得的溶液模式的影响。通过在大脑皮层对阿尔茨海默氏症患者和对照组的蛋白质进行生物测量,我们利用敏感性分析讨论了模型在模拟蛋白质扩散方面的适用性。
Exploring tau protein and amyloid-beta propagation: A sensitivity analysis of mathematical models based on biological data
Alzheimer’s disease is the most common dementia worldwide. Its pathological development is well known to be connected with the accumulation of two toxic proteins: tau protein and amyloid-. Mathematical models and numerical simulations can predict the spreading patterns of misfolded proteins in this context. However, the calibration of the model parameters plays a crucial role in the final solution. In this work, we perform a sensitivity analysis of heterodimer and Fisher–Kolmogorov models to evaluate the impact of the equilibrium values of protein concentration on the solution patterns. We adopt advanced numerical methods such as the IMEX-DG method to accurately describe the propagating fronts in the propagation phenomena in a polygonal mesh of sagittal patient-specific brain geometry derived from magnetic resonance images. We calibrate the model parameters using biological measurements in the brain cortex for the tau protein and the amyloid- in Alzheimer’s patients and controls. Finally, using the sensitivity analysis results, we discuss the applicability of both models in the correct simulation of the spreading of the two proteins.
Statement of significance: Alzheimer’s disease is related to the accumulation of tau protein and amyloid-. Mathematical models to predict the spreading patterns require accurate parameter calibration. In this work, we perform a sensitivity analysis of heterodimer and Fisher–Kolmogorov models to evaluate the impact of the equilibrium values of protein concentration on the solution patterns obtained with advanced numerical simulations on patient-specific brain geometry derived from magnetic resonance images. By using biological measurements in the brain cortex for the proteins in Alzheimer’s patients and controls, we use sensitivity analysis to discuss the applicability of models in simulating protein spreading.