NJmat:加速材料设计的数据驱动型机器学习界面

IF 5.3 2区 化学 Q1 CHEMISTRY, MEDICINAL
Yiru Huang, Lei Zhang*, Hangyuan Deng and Junfei Mao, 
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引用次数: 0

摘要

机器学习技术极大地改变了材料科学家的研究方式。然而,机器学习软件在材料和化学设计的日常实验和模拟研究中的广泛应用还很有限。部分原因在于掌握必要的代码和计算环境需要投入大量时间和学习曲线。在本文中,我们介绍了一个用户友好、数据驱动的机器学习界面,具有多种 "点击按钮 "功能,可简化材料和化学品的设计。该界面可自动转换材料和分子、执行特征选择、构建机器学习模型、进行虚拟预测和可视化结果。这种自动化加快了反向设计过程中的材料预测和分析,符合材料基因组计划提出的时间标准。只需点击简单的按钮,研究人员就能建立机器学习模型,并在收集到实验或模拟数据后预测新材料。除了易用性,NJmat 还为数据驱动的材料设计提供了三个附加功能:(1)自动生成无机材料(来自化学式)和有机分子(来自 SMILES)的特征;(2)自动生成夏普利图;(3)自动构建 "白盒 "遗传模型和决策树,以提供科学见解。我们介绍了无机和有机卤化物包晶材料表面设计的案例研究。这些案例研究说明了用于虚拟预测的通用机器学习模型以及自动特征化和 Shapley/遗传模型构建功能。我们预计,该软件工具将加快材料基因组计划范围内的材料和分子设计,特别是使实验人员受益。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

NJmat: Data-Driven Machine Learning Interface to Accelerate Material Design

NJmat: Data-Driven Machine Learning Interface to Accelerate Material Design

Machine learning techniques have significantly transformed the way materials scientists conduct research. However, the widespread deployment of machine learning software in daily experimental and simulation research for materials and chemical design has been limited. This is partly due to the substantial time investment and learning curve associated with mastering the necessary codes and computational environments. In this paper, we introduce a user-friendly, data-driven machine learning interface featuring multiple “button-clicking” functionalities to streamline the design of materials and chemicals. This interface automates the processes of transforming materials and molecules, performing feature selection, constructing machine learning models, making virtual predictions, and visualizing results. Such automation accelerates materials prediction and analysis in the inverse design process, aligning with the time criteria outlined by the Materials Genome Initiative. With simple button clicks, researchers can build machine learning models and predict new materials once they have gathered experimental or simulation data. Beyond the ease of use, NJmat offers three additional features for data-driven materials design: (1) automatic feature generation for both inorganic materials (from chemical formulas) and organic molecules (from SMILES), (2) automatic generation of Shapley plots, and (3) automatic construction of “white-box” genetic models and decision trees to provide scientific insights. We present case studies on surface design for halide perovskite materials encompassing both inorganic and organic species. These case studies illustrate general machine learning models for virtual predictions as well as the automatic featurization and Shapley/genetic model construction capabilities. We anticipate that this software tool will expedite materials and molecular design within the scope of the Materials Genome Initiative, particularly benefiting experimentalists.

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来源期刊
CiteScore
9.80
自引率
10.70%
发文量
529
审稿时长
1.4 months
期刊介绍: The Journal of Chemical Information and Modeling publishes papers reporting new methodology and/or important applications in the fields of chemical informatics and molecular modeling. Specific topics include the representation and computer-based searching of chemical databases, molecular modeling, computer-aided molecular design of new materials, catalysts, or ligands, development of new computational methods or efficient algorithms for chemical software, and biopharmaceutical chemistry including analyses of biological activity and other issues related to drug discovery. Astute chemists, computer scientists, and information specialists look to this monthly’s insightful research studies, programming innovations, and software reviews to keep current with advances in this integral, multidisciplinary field. As a subscriber you’ll stay abreast of database search systems, use of graph theory in chemical problems, substructure search systems, pattern recognition and clustering, analysis of chemical and physical data, molecular modeling, graphics and natural language interfaces, bibliometric and citation analysis, and synthesis design and reactions databases.
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