应变效应对作为抗心肌梗塞药物潜在输送载体的 WS2 单层的影响:第一原理研究。

IF 2.1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Xiao Zhu, Qinghua Yang, Yanmin Zhao, Xiusheng Sheng, Liangzhong Zhang
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引用次数: 0

摘要

背景:心肌梗塞是重大的健康挑战之一。为新型抗心肌梗塞药物开发潜在的递送载体意义重大。本文基于第一性原理计算,验证了具有优异光电特性的单层 WS2 可作为抗心肌梗塞药物胺碘酮(AMD)的载体。研究表明,WS2-吸附 AMD 系统(WS2@AMD)保持了结构的稳定性,并产生了 2.12 eV 的吸附能。穆利肯电荷分析表明,电子从 WS2 原子转移到 AMD 原子。其中,C、N 和 O 分别获得了 0.51、0.37 和 0.56 个电子的最大值,而 H 和 I 则分别失去了 0.32 和 0.24 个电子的最大值。吸附了 WS2 的 AMD 系统的光学响应与 WS2 相似。两种材料在近紫外区和可见光区的光吸收系数可达到 105 cm-1 和 104 cm-1 的数量级,应变使光吸收峰发生了红移。讨论了 WS2 作为 AMD 载体的温控释放机制的可行性。这项理论工作有助于提高二维纳米材料的性能,使其更好地作为药物递送载体,提高心肌梗塞的治疗效果。这些结果表明,WS2单层在药物递送载体的开发中具有潜在的应用前景:本研究以第一原理计算为基础,使用 CASTEP 仿真软件包研究材料的结构和性质。使用 Ultrasoft 伪势考虑了电子和离子之间的相互作用。为了消除周期性计算造成的相邻结构之间的假相互作用,必要时在垂直方向上设置了不小于 18 Å 的真空空间。不同的函数可能会产生不同的密度泛函计算结果。由于晶体结构对计算细节的敏感性较低,最初采用广义梯度近似(GGA)下的 PBE 函数进行结构优化,并将能量截止值设为 500 eV。为了使结果更加精确,使用了 Grimme 的色散校正。布里渊区(BZ)采用 7 × 7 × 1 K 点网格采样,以确保原始晶格计算的可靠性。晶格矢量和原子坐标被放宽,每个原子的公差小于 0.01 eV/Å。原子位置的能量公差小于 10-7 eV/原子。在计算带隙时,使用 HSE06 混合函数修改 PBE 函数的优化结构,以获得更精确的结果。自旋极化 DFT 计算用于计算电子结构。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

The effect of strain effect on WS2 monolayer as a potential delivery carrier for anti-myocardial infarction drug: First-principles study

The effect of strain effect on WS2 monolayer as a potential delivery carrier for anti-myocardial infarction drug: First-principles study

Context

Myocardial infarction is one of the major health challenges. It is of great significance to develop potential delivery carriers for new anti-myocardial infarction drugs. In this paper, based on first-principles calculations, monolayer WS2 with excellent photoelectric properties was verified as a carrier for the anti-myocardial infarction drug amiodarone (AMD). Studies have shown that the WS2-adsorbed AMD system (WS2@AMD) maintains structural stability and produces an adsorption energy of—2.12 eV. Mulliken charge analysis shows that electrons are transferred from WS2 atoms to AMD atoms. Among them, C, N and O obtained the maximum values of 0.51,0.37 and 0.56 e electrons, respectively, while H and I lost the maximum values of 0.32 and 0.24 e electrons, respectively. The optical response of WS2 adsorbed AMD system is similar to that of WS2. The light absorption coefficients of the two materials in the near ultraviolet region and the visible region can reach the order of 105 cm−1 and 104 cm−1, and the strain makes the light absorption peak red-shifted. The feasibility of temperature-controlled release mechanism of WS2 as AMD carrier was discussed. This theoretical work helps to improve the performance of two-dimensional nanomaterials and make them better as drug delivery carriers to improve the therapeutic effect of myocardial infarction. These results indicate that the WS2 monolayer has potential applications in the development of drug delivery carriers.

Methods

In this study, based on first-principles calculations, the CASTEP simulation software package was used to study the structure and properties of materials. The interaction between electrons and ions is considered by using Ultrasoft pseudopotentials. In order to eliminate the spurious interaction between adjacent structures caused by periodic calculations, a vacuum space no less than 18 Å is placed in the vertical direction if necessary. Different functions may produce different density functional calculation results. Due to the low sensitivity of the crystal structure to the calculation details, the PBE functional under the generalized gradient approximation (GGA) was initially used for structural optimization, and the energy cutoff value was set to 500 eV. Grimme 's dispersion correction was used to make the results more accurate. The Brillouin zone (BZ) is sampled by a 7 × 7 × 1 K-point grid to ensure the reliability of the original lattice calculation. The lattice vector and atomic coordinates are relaxed, and the tolerance of each atom is less than 0.01 eV/Å. The energy tolerance at the atomic position is less than 10–7 eV/atom. When calculating the band gap, the HSE06 hybrid functional is used to modify the optimized structure of the PBE functional to obtain more accurate results. Spin-polarized DFT calculations were performed to calculate the electronic structure.

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来源期刊
Journal of Molecular Modeling
Journal of Molecular Modeling 化学-化学综合
CiteScore
3.50
自引率
4.50%
发文量
362
审稿时长
2.9 months
期刊介绍: The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling. Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry. Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.
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