Kyung Hwa Lee, Jungwook Lee, Gwang Hyeon Choi, Jihye Yun, Jiseon Kang, Jonggi Choi, Kang Mo Kim, Namkug Kim
{"title":"利用治疗前 CT 图像和临床数据,基于深度学习预测肝细胞癌患者的治疗后生存期。","authors":"Kyung Hwa Lee, Jungwook Lee, Gwang Hyeon Choi, Jihye Yun, Jiseon Kang, Jonggi Choi, Kang Mo Kim, Namkug Kim","doi":"10.1007/s10278-024-01227-2","DOIUrl":null,"url":null,"abstract":"<p><p>The objective of this study was to develop and evaluate a model for predicting post-treatment survival in hepatocellular carcinoma (HCC) patients using their CT images and clinical information, including various treatment information. We collected pre-treatment contrast-enhanced CT images and clinical information including patient-related factors, initial treatment options, and survival status from 692 patients. The patient cohort was divided into a training cohort (n = 507), a testing cohort (n = 146), and an external CT cohort (n = 39), which included patients who underwent CT scans at other institutions. After model training using fivefold cross-validation, model validation was performed on both the testing cohort and the external CT cohort. Our cascaded model employed a 3D convolutional neural network (CNN) to extract features from CT images and derive final survival probabilities. These probabilities were obtained by concatenating previously predicted probabilities for each interval with the patient-related factors and treatment options. We utilized two consecutive fully connected layers for this process, resulting in a number of final outputs corresponding to the number of time intervals, with values representing conditional survival probabilities for each interval. Performance was assessed using the concordance index (C-index), the mean cumulative/dynamic area under the receiver operating characteristics curve (mC/D AUC), and the mean Brier score (mBS), calculated every 3 months. Through an ablation study, we found that using DenseNet-121 as the backbone network and setting the prediction interval to 6 months optimized the model's performance. The integration of multimodal data resulted in superior predictive capabilities compared to models using only CT images or clinical information (C index 0.824 [95% CI 0.822-0.826], mC/D AUC 0.893 [95% CI 0.891-0.895], and mBS 0.121 [95% CI 0.120-0.123] for internal test cohort; C index 0.750 [95% CI 0.747-0.753], mC/D AUC 0.819 [95% CI 0.816-0.823], and mBS 0.159 [95% CI 0.158-0.161] for external CT cohort, respectively). Our CNN-based discrete-time survival prediction model with CT images and clinical information demonstrated promising results in predicting post-treatment survival of patients with HCC.</p>","PeriodicalId":516858,"journal":{"name":"Journal of imaging informatics in medicine","volume":" ","pages":"1212-1223"},"PeriodicalIF":0.0000,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11950573/pdf/","citationCount":"0","resultStr":"{\"title\":\"Deep Learning-Based Prediction of Post-treatment Survival in Hepatocellular Carcinoma Patients Using Pre-treatment CT Images and Clinical Data.\",\"authors\":\"Kyung Hwa Lee, Jungwook Lee, Gwang Hyeon Choi, Jihye Yun, Jiseon Kang, Jonggi Choi, Kang Mo Kim, Namkug Kim\",\"doi\":\"10.1007/s10278-024-01227-2\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The objective of this study was to develop and evaluate a model for predicting post-treatment survival in hepatocellular carcinoma (HCC) patients using their CT images and clinical information, including various treatment information. We collected pre-treatment contrast-enhanced CT images and clinical information including patient-related factors, initial treatment options, and survival status from 692 patients. The patient cohort was divided into a training cohort (n = 507), a testing cohort (n = 146), and an external CT cohort (n = 39), which included patients who underwent CT scans at other institutions. After model training using fivefold cross-validation, model validation was performed on both the testing cohort and the external CT cohort. Our cascaded model employed a 3D convolutional neural network (CNN) to extract features from CT images and derive final survival probabilities. These probabilities were obtained by concatenating previously predicted probabilities for each interval with the patient-related factors and treatment options. We utilized two consecutive fully connected layers for this process, resulting in a number of final outputs corresponding to the number of time intervals, with values representing conditional survival probabilities for each interval. Performance was assessed using the concordance index (C-index), the mean cumulative/dynamic area under the receiver operating characteristics curve (mC/D AUC), and the mean Brier score (mBS), calculated every 3 months. Through an ablation study, we found that using DenseNet-121 as the backbone network and setting the prediction interval to 6 months optimized the model's performance. The integration of multimodal data resulted in superior predictive capabilities compared to models using only CT images or clinical information (C index 0.824 [95% CI 0.822-0.826], mC/D AUC 0.893 [95% CI 0.891-0.895], and mBS 0.121 [95% CI 0.120-0.123] for internal test cohort; C index 0.750 [95% CI 0.747-0.753], mC/D AUC 0.819 [95% CI 0.816-0.823], and mBS 0.159 [95% CI 0.158-0.161] for external CT cohort, respectively). 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引用次数: 0
摘要
本研究的目的是利用肝细胞癌(HCC)患者的 CT 图像和临床信息(包括各种治疗信息),开发并评估一个预测患者治疗后生存期的模型。我们收集了 692 名患者的治疗前对比增强 CT 图像和临床信息,包括患者相关因素、初始治疗方案和生存状况。患者队列分为训练队列(507 人)、测试队列(146 人)和外部 CT 队列(39 人),外部 CT 队列包括在其他机构接受 CT 扫描的患者。使用五倍交叉验证进行模型训练后,在测试队列和外部 CT 队列中进行模型验证。我们的级联模型采用三维卷积神经网络(CNN)从 CT 图像中提取特征,并得出最终的生存概率。这些概率是通过将先前预测的每个区间的概率与患者相关因素和治疗方案连接起来而获得的。在这一过程中,我们使用了两个连续的全连接层,最终输出的数量与时间间隔的数量相对应,其值代表了每个时间间隔的条件生存概率。使用一致性指数(C-index)、接收器操作特征曲线下的平均累积/动态面积(mC/D AUC)以及每 3 个月计算一次的平均布赖尔评分(mBS)来评估性能。通过一项消融研究,我们发现使用 DenseNet-121 作为骨干网络并将预测时间间隔设定为 6 个月可以优化模型的性能。与仅使用 CT 图像或临床信息的模型相比,多模态数据的整合带来了更优越的预测能力(C 指数 0.824 [95% CI 0.822-0.826], mC/D AUC 0.893 [95% CI 0.891-0.895]和 mBS 0.121 [95% CI 0.120-0.123];外部 CT 队列的 C 指数分别为 0.750 [95% CI 0.747-0.753]、mC/D AUC 0.819 [95% CI 0.816-0.823] 和 mBS 0.159 [95% CI 0.158-0.161])。我们的基于CNN的离散时间生存预测模型结合了CT图像和临床信息,在预测HCC患者的治疗后生存率方面取得了良好的效果。
Deep Learning-Based Prediction of Post-treatment Survival in Hepatocellular Carcinoma Patients Using Pre-treatment CT Images and Clinical Data.
The objective of this study was to develop and evaluate a model for predicting post-treatment survival in hepatocellular carcinoma (HCC) patients using their CT images and clinical information, including various treatment information. We collected pre-treatment contrast-enhanced CT images and clinical information including patient-related factors, initial treatment options, and survival status from 692 patients. The patient cohort was divided into a training cohort (n = 507), a testing cohort (n = 146), and an external CT cohort (n = 39), which included patients who underwent CT scans at other institutions. After model training using fivefold cross-validation, model validation was performed on both the testing cohort and the external CT cohort. Our cascaded model employed a 3D convolutional neural network (CNN) to extract features from CT images and derive final survival probabilities. These probabilities were obtained by concatenating previously predicted probabilities for each interval with the patient-related factors and treatment options. We utilized two consecutive fully connected layers for this process, resulting in a number of final outputs corresponding to the number of time intervals, with values representing conditional survival probabilities for each interval. Performance was assessed using the concordance index (C-index), the mean cumulative/dynamic area under the receiver operating characteristics curve (mC/D AUC), and the mean Brier score (mBS), calculated every 3 months. Through an ablation study, we found that using DenseNet-121 as the backbone network and setting the prediction interval to 6 months optimized the model's performance. The integration of multimodal data resulted in superior predictive capabilities compared to models using only CT images or clinical information (C index 0.824 [95% CI 0.822-0.826], mC/D AUC 0.893 [95% CI 0.891-0.895], and mBS 0.121 [95% CI 0.120-0.123] for internal test cohort; C index 0.750 [95% CI 0.747-0.753], mC/D AUC 0.819 [95% CI 0.816-0.823], and mBS 0.159 [95% CI 0.158-0.161] for external CT cohort, respectively). Our CNN-based discrete-time survival prediction model with CT images and clinical information demonstrated promising results in predicting post-treatment survival of patients with HCC.