黑越橘(Vaccinium membranaceum)木乃伊浆果病病原体 Monilinia vaccinii-corymbosi 的首次报告和基因组资源。

Journal of Genomics Pub Date : 2024-08-06 eCollection Date: 2024-01-01 DOI:10.7150/jgen.97432
Rishi R Burlakoti, Sanjib Sapkota, Mark Lubberts, Mehdi Sharifi
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引用次数: 0

摘要

霜霉病菌(子囊菌门,硬核菌科)会在浆果作物上引起果实病害 "木乃伊浆果",造成产量损失和果实质量下降。我们首次在加拿大不列颠哥伦比亚省报道了黑越橘(Vaccinium membranaceum)的木乃伊浆果病。我们对受感染的黑越橘果实中的 M. vacccinii-corymbosi 进行了测序和基因组组装。所得到的基因组大小为 33.8 Mbp,由 2,437 个支架组成,N50 为 33,816 bp。据我们所知,这是首次公布感染黑越橘的木乃伊浆果病原体(M. vacccinii-corymbosi)全基因组序列资源的报告。该基因组资源将对未来研究了解病原体的基因组结构以及黑胡枝子-M. vacccinii-corymbosi相互作用的相关机制具有重要价值。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
First Report and Genome Resource of Monilinia vaccinii-corymbosi, causal agent of Mummy Berry Disease of Black Huckleberry (Vaccinium membranaceum).

Monilinia vacccinii-corymbosi (phylum Ascomycota, family Sclerotiniaceae) causes fruit disease 'mummy berry' on berry crops and responsible for yield losses and quality of fruits. We reported mummy berry disease of black huckleberry (Vaccinium membranaceum) first time in British Columbia, Canada. We have performed sequencing and genome assembly of M. vacccinii-corymbosi from infected fruits of huckleberry. The resulting genome was 33.8 Mbp in size and consisted of 2,437 scaffolds with an N50 of 33,816 bp. To our best knowledge, this is the first report of resource announcement of whole genome sequence of mummy berry pathogen (M. vacccinii-corymbosi) infecting black huckleberry. The genome resource will be valuable for future studies to understand the genomic structure of pathogen, and mechanisms associated with black huckleberry-M. vacccinii-corymbosi interactions.

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来源期刊
自引率
0.00%
发文量
11
审稿时长
12 weeks
期刊介绍: Journal of Genomics publishes papers of high quality in all areas of gene, genetics, genomics, proteomics, metabolomics, DNA/RNA, computational biology, bioinformatics, and other relevant areas of research and application. Articles published by the journal are rigorously peer-reviewed. Types of articles include: Research paper, Short research communication, Review or mini-reviews, Commentary, Database, Software.
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