核细胞比平衡的随机基因表达模型

Xuesong Bai, Thomas G. Fai
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引用次数: 0

摘要

不同类型的细胞以及不同的生长和渗透条件下的细胞大小各不相同。然而,细胞核与细胞体积比(N/C 比)几乎保持不变。本文在现有的核体积比平衡确定性模型的基础上,建立了一个简化的基因翻译模型,以研究随机性对核体积比平衡的影响。我们求解了相应的化学主方程,得到了 N/C 比值的均值和方差。我们还使用泰勒展开近似法研究了系统规模对 N/C 比值波动的影响。然后,我们将翻译模型与细胞分裂模型相结合,研究细胞分裂产生的外在噪声对 N/C 比值的影响。我们的模型证明,当考虑到细胞生长的随机性时,N/C 比值能保持稳定;N/C 比值在很大程度上由核蛋白的基因比例决定;N/C 比值的波动随着系统规模的增大而减小。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Stochastic Gene Expression Model of Nuclear-to-Cell Ratio Homeostasis
Cell size varies between different cell types, and between different growth and osmotic conditions. However, the nuclear-to-cell volume ratio (N/C ratio) remains nearly constant. In this paper, we build on existing deterministic models of N/C ratio homeostasis and develop a simplified gene translation model to study the effect of stochasticity on the N/C ratio homeostasis. We solve the corresponding chemical master equation and obtain the mean and variance of the N/C ratio. We also use a Taylor expansion approximation to study the effects of the system size on the fluctuations of the N/C ratio. We then combine the translation model with a cell division model to study the effects of extrinsic noises from cell division on the N/C ratio. Our model demonstrates that the N/C ratio homeostasis is maintained when the stochasticity in cell growth is taken into account, that the N/C ratio is largely determined by the gene fraction of nuclear proteins, and that the fluctuations in the N/C ratio diminish as the system size increases.
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