Anupam Yadav, Mohammed Ahmed Mustafa, Amina Dawood Suleman, Karar R. Al-Shami, Morug Salih Mahdi, Ahmed Read Al-Tameemi, Montather F. Ramadan, Zainab Sadeq Yousif, Raheem Joui, Shahad Abdulhadi Khuder, Merwa Alhadrawi
{"title":"石墨烯作为一种新的碳同素异形体,可用于吸附和检测 SO2、AsH3、NO2、CF3H 和 CO2 等大气污染气体物种。","authors":"Anupam Yadav, Mohammed Ahmed Mustafa, Amina Dawood Suleman, Karar R. Al-Shami, Morug Salih Mahdi, Ahmed Read Al-Tameemi, Montather F. Ramadan, Zainab Sadeq Yousif, Raheem Joui, Shahad Abdulhadi Khuder, Merwa Alhadrawi","doi":"10.1007/s00894-024-06063-3","DOIUrl":null,"url":null,"abstract":"<div><h3>Context \n</h3><p>Phographene and its family member structures are of the newly proposed semiconductors for detection of chemicals. That is, in this project, the potential of using α-phographene (α-POG) both for adsorption and detection of five types of the most important air pollutant gases containing SO<sub>2</sub>, AsH<sub>3</sub>, CF<sub>3</sub>H, NO<sub>2</sub>, and CO<sub>2</sub> species were investigated. The results of the time dependent density functional theory (TD-DFT) calculations indicate that during the adsorption of NO<sub>2</sub>, and SO<sub>2</sub> by the sorbent, big redshifts occur (up to 866.2 nm, and 936.5, respectively) resulting in considerable changes in the orbitals and the electronic structures of the systems. Moreover, the results of the thermodynamic calculations reveal that α-POG could selectively adsorb SO<sub>2</sub>, NO<sub>2</sub>, and AsH3 gases (with different orders), but it could not adsorb the two other gases.Finally, the outcome of the band gap calculations shows that between all mentioned gases, α-POG could selectively detect the presence of SO<sub>2</sub>, and then NO<sub>2</sub>; while, this nanosheet could not sense the existence of AsH<sub>3</sub>, CF<sub>3</sub>H, or CO<sub>2</sub> gases.</p><h3>Methods</h3><p>All of the calculations were carried out by using the Gaussian 03 quantum chemical package. In addition, the physiochemical parameters were extracted from the output files for further calculations. Studies on all saddle points and the following calculations were performed applying the B3LYP/6-311g(d,p) level of theory. \n</p></div>","PeriodicalId":651,"journal":{"name":"Journal of Molecular Modeling","volume":null,"pages":null},"PeriodicalIF":2.1000,"publicationDate":"2024-07-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Phographene as a new carbon allotrope for adsorption and detection of SO2, AsH3, NO2, CF3H, and CO2 air pollutant gaseous species\",\"authors\":\"Anupam Yadav, Mohammed Ahmed Mustafa, Amina Dawood Suleman, Karar R. Al-Shami, Morug Salih Mahdi, Ahmed Read Al-Tameemi, Montather F. Ramadan, Zainab Sadeq Yousif, Raheem Joui, Shahad Abdulhadi Khuder, Merwa Alhadrawi\",\"doi\":\"10.1007/s00894-024-06063-3\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Context \\n</h3><p>Phographene and its family member structures are of the newly proposed semiconductors for detection of chemicals. That is, in this project, the potential of using α-phographene (α-POG) both for adsorption and detection of five types of the most important air pollutant gases containing SO<sub>2</sub>, AsH<sub>3</sub>, CF<sub>3</sub>H, NO<sub>2</sub>, and CO<sub>2</sub> species were investigated. The results of the time dependent density functional theory (TD-DFT) calculations indicate that during the adsorption of NO<sub>2</sub>, and SO<sub>2</sub> by the sorbent, big redshifts occur (up to 866.2 nm, and 936.5, respectively) resulting in considerable changes in the orbitals and the electronic structures of the systems. Moreover, the results of the thermodynamic calculations reveal that α-POG could selectively adsorb SO<sub>2</sub>, NO<sub>2</sub>, and AsH3 gases (with different orders), but it could not adsorb the two other gases.Finally, the outcome of the band gap calculations shows that between all mentioned gases, α-POG could selectively detect the presence of SO<sub>2</sub>, and then NO<sub>2</sub>; while, this nanosheet could not sense the existence of AsH<sub>3</sub>, CF<sub>3</sub>H, or CO<sub>2</sub> gases.</p><h3>Methods</h3><p>All of the calculations were carried out by using the Gaussian 03 quantum chemical package. In addition, the physiochemical parameters were extracted from the output files for further calculations. Studies on all saddle points and the following calculations were performed applying the B3LYP/6-311g(d,p) level of theory. \\n</p></div>\",\"PeriodicalId\":651,\"journal\":{\"name\":\"Journal of Molecular Modeling\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.1000,\"publicationDate\":\"2024-07-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Molecular Modeling\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s00894-024-06063-3\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Modeling","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1007/s00894-024-06063-3","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Phographene as a new carbon allotrope for adsorption and detection of SO2, AsH3, NO2, CF3H, and CO2 air pollutant gaseous species
Context
Phographene and its family member structures are of the newly proposed semiconductors for detection of chemicals. That is, in this project, the potential of using α-phographene (α-POG) both for adsorption and detection of five types of the most important air pollutant gases containing SO2, AsH3, CF3H, NO2, and CO2 species were investigated. The results of the time dependent density functional theory (TD-DFT) calculations indicate that during the adsorption of NO2, and SO2 by the sorbent, big redshifts occur (up to 866.2 nm, and 936.5, respectively) resulting in considerable changes in the orbitals and the electronic structures of the systems. Moreover, the results of the thermodynamic calculations reveal that α-POG could selectively adsorb SO2, NO2, and AsH3 gases (with different orders), but it could not adsorb the two other gases.Finally, the outcome of the band gap calculations shows that between all mentioned gases, α-POG could selectively detect the presence of SO2, and then NO2; while, this nanosheet could not sense the existence of AsH3, CF3H, or CO2 gases.
Methods
All of the calculations were carried out by using the Gaussian 03 quantum chemical package. In addition, the physiochemical parameters were extracted from the output files for further calculations. Studies on all saddle points and the following calculations were performed applying the B3LYP/6-311g(d,p) level of theory.
期刊介绍:
The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling.
Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry.
Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.