具有抗增殖活性的新型氮杂环丁烷-2-酮衍生物的硅内分子对接、ADME 研究和分子动力学模拟

Q3 Biochemistry, Genetics and Molecular Biology
Aya Ahmed, Monther Faisal
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引用次数: 0

摘要

在过去二十年中,蛋白激酶一直是抗增殖新药研发中研究较多的靶点。杂环系统因其广泛的生物特性而被确定为首选支架。本研究旨在设计和开发 15 种新型氮杂环丁烷-2-酮衍生物,并评估它们作为表皮生长因子受体抑制剂的细胞毒性潜力,表皮生长因子受体被认为是影响细胞生长和增殖的关键因素之一。我们从蛋白质数据库中检索了非活性表皮生长因子受体酪氨酸激酶结构域配体厄洛替尼的晶体结构,以便与我们提出的氮杂环丁烷-2-酮衍生物对接,评估它们作为抗增殖剂的活性。在本文中,通过一种室内分子对接方法,提出了这些氮杂环丁烷-2-酮衍生物与厄洛替尼结合位点具有令人满意的结合接触。不过,有三个化合物被确定为最强的化合物,因为它们的 PLP 适合度得分分别为(77.79、76.68 和 71.46),而参考配体的适合度得分为(71.94)。此外,我们的所有衍生物都符合瑞士-ADME 参数,表明它们可能是具有口服活性的化合物。总之,在表皮生长因子受体的活性位点上,两个化合物(A-2 和 A-8)具有更好的 PLP 适宜性,一个化合物(A-14)的得分与参考配体相当。不过,还需要进行更多的药理学评估。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
In-silico molecular docking, ADME study, and molecular dynamic simulation of new azetidin-2-one derivatives with antiproliferative activity
Over the past two decades, protein kinase has been a heavily studied target in the development of new anti-proliferative medications. Heterocyclic systems have been identified as the preferred scaffold because of their wide range of biological properties. In this research, the objective was to design and develop fifteen novel azetidin-2-one derivatives and assess their cytotoxic potential as inhibitors of the epidermal growth factor receptor, which is considered one of the key factors influencing cell growth and proliferation. The crystal structure of inactive EGFR tyrosine kinase domain ligand erlotinib from protein data bank was retrieved in order to be docked with our proposed azetidine-2-one derivatives to evaluate their activity as anti-proliferative agents. In this article, an in-silico molecular docking approach proposes that these azetidine-2-one derivatives have satisfactory binding contact with the erlotinib binding site. Although, three compounds have been identified as the most powerful as they have PLP fitness scores of (77.79, 76.68 and 71.46), respectively, while the reference ligand’s fitness score was (71.94). Additionally, all of our derivatives have satisfied the Swiss-ADME parameters, indicating that they may be orally active compounds. In conclusion, two compounds (A-2 and A-8) have better PLP fitness, and one (A-14) has a comparable score in comparison to the reference ligand, at the active site of epidermal growth factor receptor. indicating that the novel azetidine-2-one derivatives have shown interesting results and could be used as model compounds to create novel anti-proliferative drugs. However, more pharmacological evaluation is needed.
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来源期刊
Turkish Computational and Theoretical Chemistry
Turkish Computational and Theoretical Chemistry Biochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (miscellaneous)
CiteScore
2.40
自引率
0.00%
发文量
4
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