生物数字技术的不确定性:专家对林业基因组选择不确定性的看法

Gwendolyn Blue, Kristy Myles, Debra Davidson
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引用次数: 0

摘要

有关不确定性分析的文献不断涌现,这表明我们有必要就与环境决策预测模型相关的知识局限性提供易于获取且透明的信息。通过定性分析,我们研究了参与加拿大公共林业针叶树育种基因组选择(GS)开发的专家是如何评估和交流不确定性的。基因组选择是一种生物数字技术,其特点是大数据汇编、复杂的统计分析和高通量基因组测序。虽然在林业中应用基因测序技术有可能提高产量、减少误差并改善面对气候变化时对抗逆性树木的选择,但我们的数据揭示了阻碍对不确定性进行更全面讨论的障碍,包括假设通过提供更多数据可以(而且应该)消除不确定性、在商业林业运营中应用基因测序技术的默认承诺、对基因与性状线性结果的确定性假设以及在集体环境中讨论不确定性的困难。谈论不确定性会让人感到不舒服,因为这会被视为对应用研究目标的威胁,但谈论不确定性也是一种必要的、富有成效的生成方式,可以鼓励在环境应用预测模型部署的早期阶段进行跨学科和包容性的讨论。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Uncertainty talk for bio-digital technologies: Expert conceptions of uncertainties in genomic selection for forestry
The burgeoning literature on uncertainty analysis shows the need for accessible and transparent information about the limitations of knowledge associated with predictive models for environmental decision-making. Using qualitative analysis, we examine how experts involved in the development of genomic selection (GS) for Canadian public forestry conifer breeding assess and communicate uncertainty. GS is a bio-digital technology characterized by big data compilation, sophisticated statistical analysis, and high-throughput genome sequencing. While GS applications in forestry have the potential to increase yields, reduce errors, and improve the selection of resilient trees in the face of climate change, our data revealed barriers that impede more comprehensive discussions about uncertainty, including assumptions that uncertainty can (and should) be eliminated through the availability of more data, tacit commitments to the application of GS in commercial forestry operations, deterministic assumptions about linear gene-to-trait outcomes, and difficulties discussing uncertainty in collective settings. Uncertainty talk is uncomfortable as it can be perceived as a threat to applied research goals, but uncertainty talk is also a necessary, productive, and generative way to encourage transdisciplinary and inclusive discussions at early stages of predictive model deployment for environmental applications.
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