{"title":"结合和二聚化控制隔室中的相分离","authors":"Riccardo Rossetto, Gerrit Wellecke, David Zwicker","doi":"arxiv-2407.15179","DOIUrl":null,"url":null,"abstract":"Biological cells exhibit a hierarchical spatial organization, where various\ncompartments harbor condensates that form by phase separation. Cells can\ncontrol the emergence of these condensates by affecting compartment size, the\namount of the involved molecules, and their physical interactions. While\nphysical interactions directly affect compartment binding and phase separation,\nthey can also cause oligomerization, which has been suggested as a control\nmechanism. Analyzing an equilibrium model, we illustrate that oligomerization\namplifies compartment binding and phase separation, which reinforce each other.\nThis nonlinear interplay can also induce multistability, which provides\nadditional potential for control. Our work forms the basis for deriving\nthermodynamically consistent kinetic models to understand how biological cells\ncan regulate phase separation in their compartments.","PeriodicalId":501040,"journal":{"name":"arXiv - PHYS - Biological Physics","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-07-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Binding and dimerization control phase separation in a compartment\",\"authors\":\"Riccardo Rossetto, Gerrit Wellecke, David Zwicker\",\"doi\":\"arxiv-2407.15179\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Biological cells exhibit a hierarchical spatial organization, where various\\ncompartments harbor condensates that form by phase separation. Cells can\\ncontrol the emergence of these condensates by affecting compartment size, the\\namount of the involved molecules, and their physical interactions. While\\nphysical interactions directly affect compartment binding and phase separation,\\nthey can also cause oligomerization, which has been suggested as a control\\nmechanism. Analyzing an equilibrium model, we illustrate that oligomerization\\namplifies compartment binding and phase separation, which reinforce each other.\\nThis nonlinear interplay can also induce multistability, which provides\\nadditional potential for control. Our work forms the basis for deriving\\nthermodynamically consistent kinetic models to understand how biological cells\\ncan regulate phase separation in their compartments.\",\"PeriodicalId\":501040,\"journal\":{\"name\":\"arXiv - PHYS - Biological Physics\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-07-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - PHYS - Biological Physics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2407.15179\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - PHYS - Biological Physics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2407.15179","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Binding and dimerization control phase separation in a compartment
Biological cells exhibit a hierarchical spatial organization, where various
compartments harbor condensates that form by phase separation. Cells can
control the emergence of these condensates by affecting compartment size, the
amount of the involved molecules, and their physical interactions. While
physical interactions directly affect compartment binding and phase separation,
they can also cause oligomerization, which has been suggested as a control
mechanism. Analyzing an equilibrium model, we illustrate that oligomerization
amplifies compartment binding and phase separation, which reinforce each other.
This nonlinear interplay can also induce multistability, which provides
additional potential for control. Our work forms the basis for deriving
thermodynamically consistent kinetic models to understand how biological cells
can regulate phase separation in their compartments.