{"title":"EBC-Net:基于双扰动空间中边缘偏置一致性正则化的胰腺三维半监督分割。","authors":"Zheng Li, Shipeng Xie","doi":"10.1002/mp.17323","DOIUrl":null,"url":null,"abstract":"<div>\n \n \n <section>\n \n <h3> Background</h3>\n \n <p>Deep learning technology has made remarkable progress in pancreatic image segmentation tasks. However, annotating 3D medical images is time-consuming and requires expertise, and existing semi-supervised segmentation methods perform poorly in the segmentation task of organs with blurred edges in enhanced CT such as the pancreas.</p>\n </section>\n \n <section>\n \n <h3> Purpose</h3>\n \n <p>To address the challenges of limited labeled data and indistinct boundaries of regions of interest (ROI).</p>\n </section>\n \n <section>\n \n <h3> Methods</h3>\n \n <p>We propose Edge-Biased Consistency Regularization (EBC-Net). 3D edge detection is employed to construct edge perturbations and integrate edge prior information into limited data, aiding the network in learning from unlabeled data. Additionally, due to the one-sidedness of a single perturbation space, we expand the dual-level perturbation space of both images and features to more efficiently focus the model's attention on the edges of the ROI. Finally, inspired by the clinical habits of doctors, we propose a 3D Anatomical Invariance Extraction Module and Anatomical Attention to capture anatomy-invariant features.</p>\n </section>\n \n <section>\n \n <h3> Results</h3>\n \n <p>Extensive experiments have demonstrated that our method outperforms state-of-the-art methods in semi-supervised pancreas image segmentation. Moreover, it can better preserve the morphology of pancreatic organs and excel at edges region accuracy.</p>\n </section>\n \n <section>\n \n <h3> Conclusions</h3>\n \n <p>Incorporated with edge prior knowledge, our method mixes disturbances in dual-perturbation space, which shifts the network's attention to the fuzzy edge region using a few labeled samples. These ideas have been verified on the pancreas segmentation dataset.</p>\n </section>\n </div>","PeriodicalId":18384,"journal":{"name":"Medical physics","volume":"51 11","pages":"8260-8271"},"PeriodicalIF":3.2000,"publicationDate":"2024-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"EBC-Net: 3D semi-supervised segmentation of pancreas based on edge-biased consistency regularization in dual perturbation space\",\"authors\":\"Zheng Li, Shipeng Xie\",\"doi\":\"10.1002/mp.17323\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n \\n <section>\\n \\n <h3> Background</h3>\\n \\n <p>Deep learning technology has made remarkable progress in pancreatic image segmentation tasks. However, annotating 3D medical images is time-consuming and requires expertise, and existing semi-supervised segmentation methods perform poorly in the segmentation task of organs with blurred edges in enhanced CT such as the pancreas.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Purpose</h3>\\n \\n <p>To address the challenges of limited labeled data and indistinct boundaries of regions of interest (ROI).</p>\\n </section>\\n \\n <section>\\n \\n <h3> Methods</h3>\\n \\n <p>We propose Edge-Biased Consistency Regularization (EBC-Net). 3D edge detection is employed to construct edge perturbations and integrate edge prior information into limited data, aiding the network in learning from unlabeled data. Additionally, due to the one-sidedness of a single perturbation space, we expand the dual-level perturbation space of both images and features to more efficiently focus the model's attention on the edges of the ROI. Finally, inspired by the clinical habits of doctors, we propose a 3D Anatomical Invariance Extraction Module and Anatomical Attention to capture anatomy-invariant features.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Results</h3>\\n \\n <p>Extensive experiments have demonstrated that our method outperforms state-of-the-art methods in semi-supervised pancreas image segmentation. Moreover, it can better preserve the morphology of pancreatic organs and excel at edges region accuracy.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Conclusions</h3>\\n \\n <p>Incorporated with edge prior knowledge, our method mixes disturbances in dual-perturbation space, which shifts the network's attention to the fuzzy edge region using a few labeled samples. 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引用次数: 0
摘要
背景:深度学习技术在胰腺图像分割任务中取得了显著进展。然而,标注三维医学图像既耗时又需要专业知识,而且现有的半监督分割方法在胰腺等增强 CT 边缘模糊器官的分割任务中表现不佳。目的:解决标注数据有限和感兴趣区域(ROI)边界不清晰的难题:我们提出了基于边缘的一致性正则化(EBC-Net)。我们采用三维边缘检测来构建边缘扰动,并将边缘先验信息整合到有限的数据中,从而帮助网络从无标记数据中学习。此外,由于单一扰动空间的片面性,我们扩展了图像和特征的双层扰动空间,以更有效地将模型的注意力集中在 ROI 的边缘。最后,受医生临床习惯的启发,我们提出了三维解剖不变性提取模块和解剖关注,以捕捉解剖不变性特征:广泛的实验证明,在半监督胰腺图像分割方面,我们的方法优于最先进的方法。此外,它还能更好地保留胰腺器官的形态,并在边缘区域的准确性方面表现出色:我们的方法结合边缘先验知识,在双扰动空间中混合扰动,利用少量标记样本将网络的注意力转移到模糊边缘区域。这些想法已在胰腺分割数据集上得到验证。
EBC-Net: 3D semi-supervised segmentation of pancreas based on edge-biased consistency regularization in dual perturbation space
Background
Deep learning technology has made remarkable progress in pancreatic image segmentation tasks. However, annotating 3D medical images is time-consuming and requires expertise, and existing semi-supervised segmentation methods perform poorly in the segmentation task of organs with blurred edges in enhanced CT such as the pancreas.
Purpose
To address the challenges of limited labeled data and indistinct boundaries of regions of interest (ROI).
Methods
We propose Edge-Biased Consistency Regularization (EBC-Net). 3D edge detection is employed to construct edge perturbations and integrate edge prior information into limited data, aiding the network in learning from unlabeled data. Additionally, due to the one-sidedness of a single perturbation space, we expand the dual-level perturbation space of both images and features to more efficiently focus the model's attention on the edges of the ROI. Finally, inspired by the clinical habits of doctors, we propose a 3D Anatomical Invariance Extraction Module and Anatomical Attention to capture anatomy-invariant features.
Results
Extensive experiments have demonstrated that our method outperforms state-of-the-art methods in semi-supervised pancreas image segmentation. Moreover, it can better preserve the morphology of pancreatic organs and excel at edges region accuracy.
Conclusions
Incorporated with edge prior knowledge, our method mixes disturbances in dual-perturbation space, which shifts the network's attention to the fuzzy edge region using a few labeled samples. These ideas have been verified on the pancreas segmentation dataset.
期刊介绍:
Medical Physics publishes original, high impact physics, imaging science, and engineering research that advances patient diagnosis and therapy through contributions in 1) Basic science developments with high potential for clinical translation 2) Clinical applications of cutting edge engineering and physics innovations 3) Broadly applicable and innovative clinical physics developments
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