介绍 Mplots:根据海量数据集缩放时间序列递推图

IF 8.6 2区 计算机科学 Q1 COMPUTER SCIENCE, THEORY & METHODS
Maryam Shahcheraghi, Ryan Mercer, João Manuel de Almeida Rodrigues, Audrey Der, Hugo Filipe Silveira Gamboa, Zachary Zimmerman, Kerry Mauck, Eamonn Keogh
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引用次数: 0

摘要

时间序列相似性矩阵(非正式地称为递归图或点阵图)是时间序列数据挖掘的有用工具。它们可用于指导数据探索,并可从中得出各种有用的特征,然后输入到下游分析中。然而,时间序列相似性矩阵的可扩展性非常差,对时间和内存的要求都很高。在这项工作中,我们引入了新的想法,使我们能够将可检查的最大时间序列相似性矩阵扩展几个数量级。第一个想法是采用一种新颖的算法来计算矩阵,以消除对子序列长度的依赖。这种算法速度极快,使我们现在可以处理内存限制开始占主导地位的数据集。我们的第二个新贡献是一种多尺度算法,它可以根据用户内存/屏幕分辨率的限制计算矩阵的近似值,然后对用户希望放大的任何区域进行局部、即时的重新计算。由于这在很大程度上消除了时间和空间障碍,人类的视觉注意力就成了瓶颈。我们还将进一步介绍可搜索包含数万亿单元的海量矩阵的算法,然后对区域进行优先排序,以便稍后由人类或算法进行检查。我们将展示我们的想法在天文学、生物信息学、昆虫学和野生动物监测等不同领域的数据探索、分割和分类方面的实用性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Introducing Mplots: scaling time series recurrence plots to massive datasets

Introducing Mplots: scaling time series recurrence plots to massive datasets

Time series similarity matrices (informally, recurrence plots or dot-plots), are useful tools for time series data mining. They can be used to guide data exploration, and various useful features can be derived from them and then fed into downstream analytics. However, time series similarity matrices suffer from very poor scalability, taxing both time and memory requirements. In this work, we introduce novel ideas that allow us to scale the largest time series similarity matrices that can be examined by several orders of magnitude. The first idea is a novel algorithm to compute the matrices in a way that removes dependency on the subsequence length. This algorithm is so fast that it allows us to now address datasets where the memory limitations begin to dominate. Our second novel contribution is a multiscale algorithm that computes an approximation of the matrix appropriate for the limitations of the user’s memory/screen-resolution, then performs a local, just-in-time recomputation of any region that the user wishes to zoom-in on. Given that this largely removes time and space barriers, human visual attention then becomes the bottleneck. We further introduce algorithms that search massive matrices with quadrillions of cells and then prioritize regions for later examination by either humans or algorithms. We will demonstrate the utility of our ideas for data exploration, segmentation, and classification in domains as diverse as astronomy, bioinformatics, entomology, and wildlife monitoring.

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来源期刊
Journal of Big Data
Journal of Big Data Computer Science-Information Systems
CiteScore
17.80
自引率
3.70%
发文量
105
审稿时长
13 weeks
期刊介绍: The Journal of Big Data publishes high-quality, scholarly research papers, methodologies, and case studies covering a broad spectrum of topics, from big data analytics to data-intensive computing and all applications of big data research. It addresses challenges facing big data today and in the future, including data capture and storage, search, sharing, analytics, technologies, visualization, architectures, data mining, machine learning, cloud computing, distributed systems, and scalable storage. The journal serves as a seminal source of innovative material for academic researchers and practitioners alike.
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