探索完美:通过基于人机协作的主动学习方法,从 HRCT 中获得肺气道分割的无情干预艺术

IF 6.1 2区 医学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE
Shiyi Wang , Yang Nan , Sheng Zhang , Federico Felder , Xiaodan Xing , Yingying Fang , Javier Del Ser , Simon L.F. Walsh , Guang Yang
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引用次数: 0

摘要

在肺气管分割领域,标注数据的稀缺是大多数医疗分割工作的普遍痛点。与此同时,该领域采用的大多数深度学习(DL)方法也总是在努力应对其他双重挑战:"黑盒 "模型固有的不透明性和对性能提升的不断追求。为了应对这些交织在一起的挑战,我们基于人机交互(HCI)的学习模型(RS_UNet、LC_UNet、UUNet 和 WD_UNet)的核心理念取决于多样化查询策略和一系列深度学习模型的多功能组合。我们基于初始训练数据集训练四个人机交互模型,并依次重复以下步骤 1-4:(1)查询策略:我们提出的人机交互模型在每次迭代查询策略(显示待注释样本的名称和序列号)时,都会选择那些在标注时贡献了最多额外代表性信息的样本。此外,在这一阶段,模型还通过计算瓦瑟斯坦距离(Wasserstein Distance)、最小置信度(Least Confidence)、熵取样(Entropy Sampling)和随机取样(Random Sampling)来选择预测差异最大的未标注样本。(2) 中心线校正:然后,在每一轮训练中使用前一阶段选定的样本对系统生成的气管中心线进行领域专家校正。(3) 更新训练数据集:当领域专家参与到 DL 模型的每一轮迭代训练中时,他们会在每一轮迭代训练后更精确地更新训练数据集,从而增强 "黑盒 "DL 模型的可信度,提高模型的性能。(4) 模型训练:实验结果验证了这种基于人机交互的方法的有效性,表明我们提出的 WD-UNet、LC-UNet、UUNet、RS-UNet 与最先进的 DL 模型(如 WD-UNet)相比,只需 15 %-35 % 的训练数据就能实现相当甚至更优的性能,从而大幅减少(注释工作量减少 65 %-85%)医生注释时间。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Probing perfection: The relentless art of meddling for pulmonary airway segmentation from HRCT via a human-AI collaboration based active learning method

In the realm of pulmonary tracheal segmentation, the scarcity of annotated data stands as a prevalent pain point in most medical segmentation endeavors. Concurrently, most Deep Learning (DL) methodologies employed in this domain invariably grapple with other dual challenges: the inherent opacity of ‘black box’ models and the ongoing pursuit of performance enhancement. In response to these intertwined challenges, the core concept of our Human-Computer Interaction (HCI) based learning models (RS_UNet, LC_UNet, UUNet and WD_UNet) hinge on the versatile combination of diverse query strategies and an array of deep learning models. We train four HCI models based on the initial training dataset and sequentially repeat the following steps 1–4: (1) Query Strategy: Our proposed HCI models selects those samples which contribute the most additional representative information when labeled in each iteration of the query strategy (showing the names and sequence numbers of the samples to be annotated). Additionally, in this phase, the model selects the unlabeled samples with the greatest predictive disparity by calculating the Wasserstein Distance, Least Confidence, Entropy Sampling, and Random Sampling. (2) Central line correction: The selected samples in previous stage are then used for domain expert correction of the system-generated tracheal central lines in each training round. (3) Update training dataset: When domain experts are involved in each epoch of the DL model's training iterations, they update the training dataset with greater precision after each epoch, thereby enhancing the trustworthiness of the ‘black box’ DL model and improving the performance of models. (4) Model training: Proposed HCI model is trained using the updated training dataset and an enhanced version of existing UNet.

Experimental results validate the effectiveness of this Human-Computer Interaction-based approaches, demonstrating that our proposed WD-UNet, LC-UNet, UUNet, RS-UNet achieve comparable or even superior performance than the state-of-the-art DL models, such as WD-UNet with only 15 %–35 % of the training data, leading to substantial reductions (65 %–85 % reduction of annotation effort) in physician annotation time.

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来源期刊
Artificial Intelligence in Medicine
Artificial Intelligence in Medicine 工程技术-工程:生物医学
CiteScore
15.00
自引率
2.70%
发文量
143
审稿时长
6.3 months
期刊介绍: Artificial Intelligence in Medicine publishes original articles from a wide variety of interdisciplinary perspectives concerning the theory and practice of artificial intelligence (AI) in medicine, medically-oriented human biology, and health care. Artificial intelligence in medicine may be characterized as the scientific discipline pertaining to research studies, projects, and applications that aim at supporting decision-based medical tasks through knowledge- and/or data-intensive computer-based solutions that ultimately support and improve the performance of a human care provider.
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