利用机器学习算法和临床数据预测晚期口腔癌辅助治疗后疾病复发的风险因素

Sheng-Yao Huang, Ren-Jun Hsu, Dai-Wei Liu, Wen-Lin Hsu
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摘要

摘要 头颈癌是台湾的主要癌症。大多数患者在初诊时已处于晚期。除了初级手术外,化疗和放疗等辅助治疗也是治疗这些患者的必要手段。我们使用机器学习工具来确定可能与治疗结果相关并可预测治疗结果的因素。 我们回顾性研究了 187 例确诊为晚期头颈癌的患者,这些患者接受了手术和辅助放化疗(无论有无化疗)。我们使用基于梯度树模型的梯度提升(eXtreme Gradient Boosting,XGBoost)来分析数据。我们从电子医疗系统和纸质病历中记录的条目中提取特征。患者数据被分为训练数据集和测试数据集,并根据患者在5年随访期间的复发状况进行标记。主要终点是预测患者是否复发。风险因素是通过分析模型中特征的重要性确定的。为了进行比较,我们还使用回归法进行变异分析,以确定风险因素。 该模型的准确率、灵敏度和阳性预测值分别为 57.89%、57.14% 和 44.44%。病理淋巴结状态是最重要的特征,其次是患者是否接受化疗。分量、提前终止和中断是与放疗相关的重要因素,可能会影响治疗结果。接受者操作特征曲线的曲线下面积为 0.58。XGBoost发现的危险因素与回归发现的危险因素一致。 我们发现有几个因素与晚期头颈癌的治疗结果相关。今后,我们希望根据本研究介绍的特征收集数据,并构建一个更强大的模型来解释和预测结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Using a machine learning algorithm and clinical data to predict the risk factors of disease recurrence after adjuvant treatment of advanced-stage oral cavity cancer
ABSTRACT Head-and-neck cancer is a major cancer in Taiwan. Most patients are in the advanced stage at initial diagnosis. In addition to primary surgery, adjuvant therapy, including chemotherapy and radiotherapy, is also necessary to treat these patients. We used a machine learning tool to determine the factors that may be associated with and predict treatment outcome. We retrospectively reviewed 187 patients diagnosed with advanced-stage head-and-neck cancer who received surgery and adjuvant radiotherapy with or without chemotherapy. We used eXtreme Gradient Boosting (XGBoost) – a gradient tree-based model – to analyze data. The features were extracted from the entries we recorded from the electronic health-care system and paper medical record. The patient data were categorized into training and testing datasets, with labeling according to their recurrence status within the 5-year follow-up. The primary endpoint was to predict whether the patients had recurrent disease. The risk factors were identified by analyzing the feature importance in the model. For comparison, we also used regression to perform the variate analysis to identify the risk factors. The accuracy, sensitivity, and positive predictive value of the model were 57.89%, 57.14%, and 44.44%, respectively. Pathological lymph node status was the most important feature, followed by whether the patient was receiving chemotherapy. Fraction size, early termination, and interruption were the important factors related to radiotherapy and might affect treatment outcome. The area under the curve of the receiver operating characteristic curve was 0.58. The risk factors identified by XGBoost were consistent with those found by regression. We found that several factors were associated with treatment outcome in advanced-stage head-and-neck cancer. In future, we hope to collect the data according to the features introduced in this study and to construct a stronger model to explain and predict outcomes.
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