S. Madhan , M. NizamMohideen , Vinayagam Pavunkumar , Arasambattu K. MohanaKrishnan
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MohanaKrishnan","doi":"10.1107/S2056989024006649","DOIUrl":null,"url":null,"abstract":"<div><p>The crystal structures of two 1<em>H</em>-indole derivatives are described and the intermolecular contacts in the crystals are assessed and analysed using Hirshfeld surface analysis and two-dimensional fingerprint plots.</p></div><div><p>Two new [1-(phenylsulfonyl)-1<em>H</em>-indol-2-yl]methanamine derivatives, namely, <em>N</em>-(3-methoxyphenyl)-<em>N</em>-{[1-(phenylsulfonyl)-1<em>H</em>-indol-2-yl]methyl}acetamide, C<sub>24</sub>H<sub>22</sub>N<sub>2</sub>O<sub>4</sub>S, (<strong>I</strong>), and <em>N</em>-(2,5-dimethoxyphenyl)-<em>N</em>-{[1-(phenylsulfonyl)-1<em>H</em>-indol-2-yl]methyl}benzenesulfonamide, C<sub>29</sub>H<sub>26</sub>N<sub>2</sub>O<sub>6</sub>S<sub>2</sub>, (<strong>II</strong>), reveal a nearly orthogonal orientation of their indole ring systems and sulfonyl-bound phenyl rings. The sulfonyl moieties adopt the anti-periplanar conformation. For both compounds, the crystal packing is dominated by C—H⋯O bonding [C⋯O = 3.312 (4)–3.788 (8) Å], with the structure of <strong>II</strong> exhibiting a larger number, but weaker bonds of this type. Slipped π–π interactions of antiparallel indole systems are specific for <strong>I</strong>, whereas the structure of <strong>II</strong> delivers two kinds of C—H⋯π interactions at both axial sides of the indole moiety. These findings agree with the results of Hirshfeld surface analysis. The primary contributions to the surface areas are associated with the contacts involving H atoms. Although <strong>II</strong> manifests a larger fraction of the O⋯H/H⋯O contacts (25.8 <em>versus</em> 22.4%), most of them are relatively distal and agree with the corresponding van der Waals separations.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 8","pages":"Pages 845-851"},"PeriodicalIF":0.5000,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Crystal structure determination and Hirshfeld surface analysis of N-acetyl-N-3-methoxyphenyl and N-(2,5-dimethoxyphenyl)-N-phenylsulfonyl derivatives of N-[1-(phenylsulfonyl)-1H-indol-2-yl]methanamine\",\"authors\":\"S. Madhan , M. NizamMohideen , Vinayagam Pavunkumar , Arasambattu K. MohanaKrishnan\",\"doi\":\"10.1107/S2056989024006649\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The crystal structures of two 1<em>H</em>-indole derivatives are described and the intermolecular contacts in the crystals are assessed and analysed using Hirshfeld surface analysis and two-dimensional fingerprint plots.</p></div><div><p>Two new [1-(phenylsulfonyl)-1<em>H</em>-indol-2-yl]methanamine derivatives, namely, <em>N</em>-(3-methoxyphenyl)-<em>N</em>-{[1-(phenylsulfonyl)-1<em>H</em>-indol-2-yl]methyl}acetamide, C<sub>24</sub>H<sub>22</sub>N<sub>2</sub>O<sub>4</sub>S, (<strong>I</strong>), and <em>N</em>-(2,5-dimethoxyphenyl)-<em>N</em>-{[1-(phenylsulfonyl)-1<em>H</em>-indol-2-yl]methyl}benzenesulfonamide, C<sub>29</sub>H<sub>26</sub>N<sub>2</sub>O<sub>6</sub>S<sub>2</sub>, (<strong>II</strong>), reveal a nearly orthogonal orientation of their indole ring systems and sulfonyl-bound phenyl rings. The sulfonyl moieties adopt the anti-periplanar conformation. For both compounds, the crystal packing is dominated by C—H⋯O bonding [C⋯O = 3.312 (4)–3.788 (8) Å], with the structure of <strong>II</strong> exhibiting a larger number, but weaker bonds of this type. Slipped π–π interactions of antiparallel indole systems are specific for <strong>I</strong>, whereas the structure of <strong>II</strong> delivers two kinds of C—H⋯π interactions at both axial sides of the indole moiety. These findings agree with the results of Hirshfeld surface analysis. The primary contributions to the surface areas are associated with the contacts involving H atoms. 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引用次数: 0
摘要
两种新的[1-(苯磺酰基)-1H-吲哚-2-基]甲胺衍生物,即N-(3-甲氧基苯基)-N-{[1-(苯磺酰基)-1H-吲哚-2-基]甲基}乙酰胺,C24H22N2O4S,(I)和N-(2、和 N-(2,5-二甲氧基苯基)-N-{[1-(苯磺酰基)-1H-吲哚-2-基]甲基}苯磺酰胺,C29H26N2O6S2,(II),显示出它们的吲哚环系统和磺酰基结合的苯基环的取向几乎是正交的。磺酰基采用反全平面构象。这两种化合物的晶体结构都以 C-H...O 键为主[C...O = 3.312 (4)-3.788 (8) Å],其中 II 的结构中这类键的数量较多,但强度较弱。反平行吲哚体系的滑动 π-π 相互作用是 I 的特异之处,而 II 的结构则在吲哚分子的两个轴向提供了两种 C-H...π 相互作用。这些发现与 Hirshfeld 表面分析的结果一致。表面积的主要贡献与涉及 H 原子的接触有关。虽然 II 的 O...H/H...O 接触比例较大(25.8% 对 22.4%),但大部分接触距离相对较远,与相应的范德华分离度一致。
Crystal structure determination and Hirshfeld surface analysis of N-acetyl-N-3-methoxyphenyl and N-(2,5-dimethoxyphenyl)-N-phenylsulfonyl derivatives of N-[1-(phenylsulfonyl)-1H-indol-2-yl]methanamine
The crystal structures of two 1H-indole derivatives are described and the intermolecular contacts in the crystals are assessed and analysed using Hirshfeld surface analysis and two-dimensional fingerprint plots.
Two new [1-(phenylsulfonyl)-1H-indol-2-yl]methanamine derivatives, namely, N-(3-methoxyphenyl)-N-{[1-(phenylsulfonyl)-1H-indol-2-yl]methyl}acetamide, C24H22N2O4S, (I), and N-(2,5-dimethoxyphenyl)-N-{[1-(phenylsulfonyl)-1H-indol-2-yl]methyl}benzenesulfonamide, C29H26N2O6S2, (II), reveal a nearly orthogonal orientation of their indole ring systems and sulfonyl-bound phenyl rings. The sulfonyl moieties adopt the anti-periplanar conformation. For both compounds, the crystal packing is dominated by C—H⋯O bonding [C⋯O = 3.312 (4)–3.788 (8) Å], with the structure of II exhibiting a larger number, but weaker bonds of this type. Slipped π–π interactions of antiparallel indole systems are specific for I, whereas the structure of II delivers two kinds of C—H⋯π interactions at both axial sides of the indole moiety. These findings agree with the results of Hirshfeld surface analysis. The primary contributions to the surface areas are associated with the contacts involving H atoms. Although II manifests a larger fraction of the O⋯H/H⋯O contacts (25.8 versus 22.4%), most of them are relatively distal and agree with the corresponding van der Waals separations.
期刊介绍:
Acta Crystallographica Section E: Crystallographic Communications is the IUCr''s open-access structural communications journal. It provides a fast, simple and easily accessible publication mechanism for crystal structure determinations of inorganic, metal-organic and organic compounds. The electronic submission, validation, refereeing and publication facilities of the journal ensure rapid and high-quality publication of fully validated structures. The primary article category is Research Communications; these are peer-reviewed articles describing one or more structure determinations with appropriate discussion of the science.