利用环境协变量预测和绘制桉树克隆的生产力图谱

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Leonardo Oliveira Silva da Costa, Izabel Christina Gava de Souza, Aline Cristina Miranda Fernandes, Aurélio Mendes Aguiar, Flávia Maria Avelar Gonçalves, Evandro Novaes
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引用次数: 0

摘要

木材生产的定量性质给育种人员带来了挑战。基因型与环境之间复杂的相互作用(G×E)使得品种推荐变得困难。我们的目标是利用环境协变量建立 G×E 相互作用模型,并基于地理信息系统(GIS)绘制巴西重要种植区的商业桉树克隆适应性地图。为此,研究人员利用了一个包含 13,483 个林分的生产力数据集,其中有 6 个商业克隆。利用 WorldClim 和 SoilGrids 数据库中的数据,采用偏最小二乘法回归法建立了地理、土壤和气候协变量对克隆产量的影响模型。利用每个克隆的模型,生成了空间分辨率约为 5 平方公里的产量图。然后,通过逐像素比较各克隆的预测产量值,推荐栽培品种。对克隆表现影响最大的协变量是年降雨量、最干旱月份的降雨量、最干旱季度的降雨量、最炎热月份的最高气温和最潮湿季度的平均气温。因此,基于环境协变量的 G×E 模型与地理信息系统相结合,可通过绘制基因型在每个地点的适应性图谱,大大提高栽培品种推荐的分辨率。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Prediction and mapping the productivity of eucalyptus clones with environmental covariates

Prediction and mapping the productivity of eucalyptus clones with environmental covariates

The quantitative nature of wood production poses a challenge for breeders. The complex interaction of genotypes with environments (G×E) makes cultivars recommendation difficult. Our objective was to model the G×E interaction using environmental covariates and map the adaptability of commercial Eucalyptus clones based on a geographic information system (GIS) across important plantation regions in Brazil. To achieve this, a productivity dataset with 13,483 stands of six commercial clones was utilized. The effects of geography, soil and climate covariates on clone yield were modeled using partial least squares regression, with data from WorldClim and SoilGrids databases. Using the models for each clone, yield maps were generated at a spatial resolution of approximately 5 km². Then, cultivar recommendation was made through a pixel-by-pixel comparison of predicted yield values among the clones. The covariates that most affected the performance of the clones were annual rainfall, rainfall of the driest month, rainfall of the driest quarter, maximum temperature of the hottest month and average temperature of the wettest quarter. Thus, G×E modeling based on environmental covariates combined with GIS enables a large increase in the resolution of cultivar recommendations by mapping the adaptability of genotypes in each site.

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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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