Bo-Hao Tang, Xin-Fang Zhang, Shu-Meng Fu, Bu-Fan Yao, Wei Zhang, Yue-E Wu, Yi Zheng, Yue Zhou, John van den Anker, Hai-Rong Huang, Guo-Xiang Hao, Wei Zhao
{"title":"结核病异烟肼剂量个体化的机器学习方法","authors":"Bo-Hao Tang, Xin-Fang Zhang, Shu-Meng Fu, Bu-Fan Yao, Wei Zhang, Yue-E Wu, Yi Zheng, Yue Zhou, John van den Anker, Hai-Rong Huang, Guo-Xiang Hao, Wei Zhao","doi":"10.1007/s40262-024-01400-4","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction: </strong>Isoniazid is a first-line antituberculosis agent with high variability, which would profit from individualized dosing. Concentrations of isoniazid at 2 h (C<sub>2h</sub>), as an indicator of safety and efficacy, are important for optimizing therapy.</p><p><strong>Objective: </strong>The objective of this study was to establish machine learning (ML) models to predict the C<sub>2h</sub>, that can be used for establishing an individualized dosing regimen in clinical practice.</p><p><strong>Methods: </strong>Published population pharmacokinetic (PopPK) models for adults were searched based on PubMed and ultimately four reliable models were selected for simulating individual C<sub>2h</sub> datasets under different conditions (demographics, genotype, ethnicity, etc.). Machine learning models were trained on simulated C<sub>2h</sub> obtained from the four PopPK models. Five different algorithms were used for ML model building to predict C<sub>2h</sub>. Real-world data were used for predictive performance evaluations. Virtual trials were used to compare ML-optimized doses with PopPK model-optimized doses.</p><p><strong>Results: </strong>Categorical boosting (CatBoost) exhibited the highest prediction ability. Target C<sub>2h</sub> can be predicted using the ML model combined with the dosing regimen and three covariates (N-acetyltransferase 2 [NAT2] genotypes, weight and race [Asians and Africans]). Real-world data validation results showed that the ML model can achieve an overall prediction accuracy of 93.4%. Using the final ML model, the mean absolute prediction error value decreased by 45.7% relative to the average of PopPK models. Using the ML-optimized dosing regimen, the probability of target attainment increased by 43.7% relative to the PopPK model-optimized dosing regimens.</p><p><strong>Conclusion: </strong>Machine learning models were developed with great predictive performance, which can be used to determine the individualized initial dose of isoniazid in adult patients.</p>","PeriodicalId":10405,"journal":{"name":"Clinical Pharmacokinetics","volume":" ","pages":"1055-1063"},"PeriodicalIF":4.6000,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Machine Learning Approach in Dosage Individualization of Isoniazid for Tuberculosis.\",\"authors\":\"Bo-Hao Tang, Xin-Fang Zhang, Shu-Meng Fu, Bu-Fan Yao, Wei Zhang, Yue-E Wu, Yi Zheng, Yue Zhou, John van den Anker, Hai-Rong Huang, Guo-Xiang Hao, Wei Zhao\",\"doi\":\"10.1007/s40262-024-01400-4\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Introduction: </strong>Isoniazid is a first-line antituberculosis agent with high variability, which would profit from individualized dosing. Concentrations of isoniazid at 2 h (C<sub>2h</sub>), as an indicator of safety and efficacy, are important for optimizing therapy.</p><p><strong>Objective: </strong>The objective of this study was to establish machine learning (ML) models to predict the C<sub>2h</sub>, that can be used for establishing an individualized dosing regimen in clinical practice.</p><p><strong>Methods: </strong>Published population pharmacokinetic (PopPK) models for adults were searched based on PubMed and ultimately four reliable models were selected for simulating individual C<sub>2h</sub> datasets under different conditions (demographics, genotype, ethnicity, etc.). Machine learning models were trained on simulated C<sub>2h</sub> obtained from the four PopPK models. Five different algorithms were used for ML model building to predict C<sub>2h</sub>. Real-world data were used for predictive performance evaluations. Virtual trials were used to compare ML-optimized doses with PopPK model-optimized doses.</p><p><strong>Results: </strong>Categorical boosting (CatBoost) exhibited the highest prediction ability. Target C<sub>2h</sub> can be predicted using the ML model combined with the dosing regimen and three covariates (N-acetyltransferase 2 [NAT2] genotypes, weight and race [Asians and Africans]). Real-world data validation results showed that the ML model can achieve an overall prediction accuracy of 93.4%. Using the final ML model, the mean absolute prediction error value decreased by 45.7% relative to the average of PopPK models. Using the ML-optimized dosing regimen, the probability of target attainment increased by 43.7% relative to the PopPK model-optimized dosing regimens.</p><p><strong>Conclusion: </strong>Machine learning models were developed with great predictive performance, which can be used to determine the individualized initial dose of isoniazid in adult patients.</p>\",\"PeriodicalId\":10405,\"journal\":{\"name\":\"Clinical Pharmacokinetics\",\"volume\":\" \",\"pages\":\"1055-1063\"},\"PeriodicalIF\":4.6000,\"publicationDate\":\"2024-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Clinical Pharmacokinetics\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1007/s40262-024-01400-4\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/7/11 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"PHARMACOLOGY & PHARMACY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Clinical Pharmacokinetics","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1007/s40262-024-01400-4","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/7/11 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"PHARMACOLOGY & PHARMACY","Score":null,"Total":0}
引用次数: 0
摘要
介绍:异烟肼是一种一线抗结核药物,具有很高的变异性,个体化用药将使其获益匪浅。异烟肼在 2 小时内的浓度(C2h)作为安全性和有效性的指标,对于优化治疗非常重要:本研究旨在建立预测 C2h 的机器学习(ML)模型,用于在临床实践中制定个体化给药方案:方法: 在PubMed上搜索已发表的成人群体药代动力学(PopPK)模型,最终选出四个可靠的模型,用于模拟不同条件(人口统计学、基因型、种族等)下的个体C2h数据集。机器学习模型是在四个 PopPK 模型获得的模拟 C2h 上进行训练的。在建立预测 C2h 的 ML 模型时使用了五种不同的算法。真实世界数据用于预测性能评估。虚拟试验用于比较 ML 优化剂量与 PopPK 模型优化剂量:结果:分类提升(CatBoost)的预测能力最高。使用 ML 模型结合给药方案和三个协变量(N-乙酰转移酶 2 [NAT2] 基因型、体重和种族 [亚洲人和非洲人])可预测目标 C2h。实际数据验证结果表明,ML 模型的总体预测准确率可达 93.4%。使用最终的 ML 模型,平均绝对预测误差值比 PopPK 模型的平均值降低了 45.7%。与PopPK模型优化的给药方案相比,使用ML优化的给药方案,达到目标的概率增加了43.7%:机器学习模型具有很好的预测性能,可用于确定成年患者异烟肼的个体化初始剂量。
Machine Learning Approach in Dosage Individualization of Isoniazid for Tuberculosis.
Introduction: Isoniazid is a first-line antituberculosis agent with high variability, which would profit from individualized dosing. Concentrations of isoniazid at 2 h (C2h), as an indicator of safety and efficacy, are important for optimizing therapy.
Objective: The objective of this study was to establish machine learning (ML) models to predict the C2h, that can be used for establishing an individualized dosing regimen in clinical practice.
Methods: Published population pharmacokinetic (PopPK) models for adults were searched based on PubMed and ultimately four reliable models were selected for simulating individual C2h datasets under different conditions (demographics, genotype, ethnicity, etc.). Machine learning models were trained on simulated C2h obtained from the four PopPK models. Five different algorithms were used for ML model building to predict C2h. Real-world data were used for predictive performance evaluations. Virtual trials were used to compare ML-optimized doses with PopPK model-optimized doses.
Results: Categorical boosting (CatBoost) exhibited the highest prediction ability. Target C2h can be predicted using the ML model combined with the dosing regimen and three covariates (N-acetyltransferase 2 [NAT2] genotypes, weight and race [Asians and Africans]). Real-world data validation results showed that the ML model can achieve an overall prediction accuracy of 93.4%. Using the final ML model, the mean absolute prediction error value decreased by 45.7% relative to the average of PopPK models. Using the ML-optimized dosing regimen, the probability of target attainment increased by 43.7% relative to the PopPK model-optimized dosing regimens.
Conclusion: Machine learning models were developed with great predictive performance, which can be used to determine the individualized initial dose of isoniazid in adult patients.
期刊介绍:
Clinical Pharmacokinetics promotes the continuing development of clinical pharmacokinetics and pharmacodynamics for the improvement of drug therapy, and for furthering postgraduate education in clinical pharmacology and therapeutics.
Pharmacokinetics, the study of drug disposition in the body, is an integral part of drug development and rational use. Knowledge and application of pharmacokinetic principles leads to accelerated drug development, cost effective drug use and a reduced frequency of adverse effects and drug interactions.