Maarten W.J. van den Ende , Mathijs Maijer , Mike H. Lees , Han L.J. van der Maas
{"title":"使用 DyNSimF 研究网络中的动力学和动力学","authors":"Maarten W.J. van den Ende , Mathijs Maijer , Mike H. Lees , Han L.J. van der Maas","doi":"10.1016/j.jocs.2024.102376","DOIUrl":null,"url":null,"abstract":"<div><p>Advances in formal theories, network science, and data collection technologies make complex-agent networks and adaptive networks increasingly powerful tools in the fields’ of complexity science and computational social science. We present DyNSimF; an open source package that facilitates the modelling of adaptive networks, capturing complex interacting dynamics <em>on</em> a network as well as dynamics <em>of</em> (the structure of) a network. Capable of complex agent-based simulations on a dynamic network, it is able to capture individual-level dynamics as well as dynamics of the network structure, and how these interact and evolve. By capturing the emergent behaviour resulting from the interactions of node states and network topology, we argue that DyNSimF will help modellers to gain a fundamentally better understanding of complex network systems. The package can handle both weighted and directional links, is computationally scalable and efficient, and includes a generic utility-based edge selection framework. DyNSimF provides a generic modelling framework for dynamics networks and includes visualisation methods and tools to aid in the analysis of models. It is designed to be extensible and aims to be easy to learn and work with, allowing non-experts to focus on model development, while being highly customisable and extensible to allow for complex custom models.</p></div>","PeriodicalId":48907,"journal":{"name":"Journal of Computational Science","volume":"81 ","pages":"Article 102376"},"PeriodicalIF":3.1000,"publicationDate":"2024-07-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1877750324001698/pdfft?md5=bfde277a854940b4fe03df398c525d51&pid=1-s2.0-S1877750324001698-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Dynamics in and dynamics of networks using DyNSimF\",\"authors\":\"Maarten W.J. van den Ende , Mathijs Maijer , Mike H. Lees , Han L.J. van der Maas\",\"doi\":\"10.1016/j.jocs.2024.102376\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Advances in formal theories, network science, and data collection technologies make complex-agent networks and adaptive networks increasingly powerful tools in the fields’ of complexity science and computational social science. We present DyNSimF; an open source package that facilitates the modelling of adaptive networks, capturing complex interacting dynamics <em>on</em> a network as well as dynamics <em>of</em> (the structure of) a network. Capable of complex agent-based simulations on a dynamic network, it is able to capture individual-level dynamics as well as dynamics of the network structure, and how these interact and evolve. By capturing the emergent behaviour resulting from the interactions of node states and network topology, we argue that DyNSimF will help modellers to gain a fundamentally better understanding of complex network systems. The package can handle both weighted and directional links, is computationally scalable and efficient, and includes a generic utility-based edge selection framework. DyNSimF provides a generic modelling framework for dynamics networks and includes visualisation methods and tools to aid in the analysis of models. It is designed to be extensible and aims to be easy to learn and work with, allowing non-experts to focus on model development, while being highly customisable and extensible to allow for complex custom models.</p></div>\",\"PeriodicalId\":48907,\"journal\":{\"name\":\"Journal of Computational Science\",\"volume\":\"81 \",\"pages\":\"Article 102376\"},\"PeriodicalIF\":3.1000,\"publicationDate\":\"2024-07-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S1877750324001698/pdfft?md5=bfde277a854940b4fe03df398c525d51&pid=1-s2.0-S1877750324001698-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Computational Science\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1877750324001698\",\"RegionNum\":3,\"RegionCategory\":\"计算机科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Computational Science","FirstCategoryId":"94","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1877750324001698","RegionNum":3,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Dynamics in and dynamics of networks using DyNSimF
Advances in formal theories, network science, and data collection technologies make complex-agent networks and adaptive networks increasingly powerful tools in the fields’ of complexity science and computational social science. We present DyNSimF; an open source package that facilitates the modelling of adaptive networks, capturing complex interacting dynamics on a network as well as dynamics of (the structure of) a network. Capable of complex agent-based simulations on a dynamic network, it is able to capture individual-level dynamics as well as dynamics of the network structure, and how these interact and evolve. By capturing the emergent behaviour resulting from the interactions of node states and network topology, we argue that DyNSimF will help modellers to gain a fundamentally better understanding of complex network systems. The package can handle both weighted and directional links, is computationally scalable and efficient, and includes a generic utility-based edge selection framework. DyNSimF provides a generic modelling framework for dynamics networks and includes visualisation methods and tools to aid in the analysis of models. It is designed to be extensible and aims to be easy to learn and work with, allowing non-experts to focus on model development, while being highly customisable and extensible to allow for complex custom models.
期刊介绍:
Computational Science is a rapidly growing multi- and interdisciplinary field that uses advanced computing and data analysis to understand and solve complex problems. It has reached a level of predictive capability that now firmly complements the traditional pillars of experimentation and theory.
The recent advances in experimental techniques such as detectors, on-line sensor networks and high-resolution imaging techniques, have opened up new windows into physical and biological processes at many levels of detail. The resulting data explosion allows for detailed data driven modeling and simulation.
This new discipline in science combines computational thinking, modern computational methods, devices and collateral technologies to address problems far beyond the scope of traditional numerical methods.
Computational science typically unifies three distinct elements:
• Modeling, Algorithms and Simulations (e.g. numerical and non-numerical, discrete and continuous);
• Software developed to solve science (e.g., biological, physical, and social), engineering, medicine, and humanities problems;
• Computer and information science that develops and optimizes the advanced system hardware, software, networking, and data management components (e.g. problem solving environments).