{"title":"内部 DNA 复制反应诱导水基两相体系中的自生长原细胞模型","authors":"Yoshihiro Minagawa, Moe Yabuta, Masayuki Su'estugu, Hiroyuki Noji","doi":"10.1101/2024.07.01.599542","DOIUrl":null,"url":null,"abstract":"The bottom-up reconstitution of self-growing artificial cells is a critical milestone toward realizing autonomy and evolvability. However, building artificial cells that exhibit self-growth coupled with internal replication of gene-encoding DNA has not been achieved yet. Here, we report self-growing artificial cell models based on dextran-rich droplets in an aqueous two-phase system of poly(ethylene glycol) (PEG) and dextran (DEX). Motivated by the finding that DNA induces the generation of DEX-rich droplets, we integrated DNA amplification system with DEX-rich droplets, which exhibited active self-growth. We implemented the protocells with cell-free transcription-translation (TXTL) systems coupled with DNA amplification/replication, which also showed active self-growth. We also observed self-growth activity of protocells carrying a single copy of DNA. Considering the simplicities in terms of the chemical composition and the mechanism, these results underscore the potential of DEX droplets as a foundational platform for engineering protocells, giving implications for the emergence of protocells under prebiotic conditions.","PeriodicalId":501408,"journal":{"name":"bioRxiv - Synthetic Biology","volume":"57 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-07-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Self-growing protocell models in aqueous two-phase system induced by internal DNA replication reaction\",\"authors\":\"Yoshihiro Minagawa, Moe Yabuta, Masayuki Su'estugu, Hiroyuki Noji\",\"doi\":\"10.1101/2024.07.01.599542\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The bottom-up reconstitution of self-growing artificial cells is a critical milestone toward realizing autonomy and evolvability. However, building artificial cells that exhibit self-growth coupled with internal replication of gene-encoding DNA has not been achieved yet. Here, we report self-growing artificial cell models based on dextran-rich droplets in an aqueous two-phase system of poly(ethylene glycol) (PEG) and dextran (DEX). Motivated by the finding that DNA induces the generation of DEX-rich droplets, we integrated DNA amplification system with DEX-rich droplets, which exhibited active self-growth. We implemented the protocells with cell-free transcription-translation (TXTL) systems coupled with DNA amplification/replication, which also showed active self-growth. We also observed self-growth activity of protocells carrying a single copy of DNA. Considering the simplicities in terms of the chemical composition and the mechanism, these results underscore the potential of DEX droplets as a foundational platform for engineering protocells, giving implications for the emergence of protocells under prebiotic conditions.\",\"PeriodicalId\":501408,\"journal\":{\"name\":\"bioRxiv - Synthetic Biology\",\"volume\":\"57 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-07-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"bioRxiv - Synthetic Biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1101/2024.07.01.599542\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"bioRxiv - Synthetic Biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1101/2024.07.01.599542","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
自下而上重组自生长人造细胞是实现自主性和可进化性的一个重要里程碑。然而,目前还没有人能够构建出既能自我生长又能在内部复制基因编码 DNA 的人工细胞。在此,我们报告了基于聚乙二醇(PEG)和葡聚糖(DEX)水性两相体系中富含葡聚糖的液滴的自生长人工细胞模型。DNA 能诱导生成富含右旋糖酐的液滴,受此发现的启发,我们将 DNA 扩增系统与富含右旋糖酐的液滴整合在一起,富含右旋糖酐的液滴表现出活跃的自生长特性。我们在原细胞中实施了与 DNA 扩增/复制相结合的无细胞转录-翻译(TXTL)系统,该系统也表现出活跃的自我生长。我们还观察到了携带单个 DNA 拷贝的原细胞的自我生长活性。考虑到化学成分和机制方面的简易性,这些结果凸显了 DEX 液滴作为原生细胞工程基础平台的潜力,并对前生物条件下原生细胞的出现产生了影响。
Self-growing protocell models in aqueous two-phase system induced by internal DNA replication reaction
The bottom-up reconstitution of self-growing artificial cells is a critical milestone toward realizing autonomy and evolvability. However, building artificial cells that exhibit self-growth coupled with internal replication of gene-encoding DNA has not been achieved yet. Here, we report self-growing artificial cell models based on dextran-rich droplets in an aqueous two-phase system of poly(ethylene glycol) (PEG) and dextran (DEX). Motivated by the finding that DNA induces the generation of DEX-rich droplets, we integrated DNA amplification system with DEX-rich droplets, which exhibited active self-growth. We implemented the protocells with cell-free transcription-translation (TXTL) systems coupled with DNA amplification/replication, which also showed active self-growth. We also observed self-growth activity of protocells carrying a single copy of DNA. Considering the simplicities in terms of the chemical composition and the mechanism, these results underscore the potential of DEX droplets as a foundational platform for engineering protocells, giving implications for the emergence of protocells under prebiotic conditions.