解读天然双黄酮类化合物抑制流感神经氨酸酶的潜力:硅学方法

IF 2.1 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY
Kolade O. Faloye, Shaban Ahmad, Olubunmi T. Oyasowo, Esther O. Shalom, Nagmi Bano, Esther A. Olanudun, Tawakalit O. Kelani, Habeeb E. Aliyu, Khalid Raza, Boluwaji I. Makinde, Abdullah R. Alanzi
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引用次数: 0

摘要

流感感染对人类和动物的生存构成严重威胁。次生代谢物对流感的抑制作用可能是解决流感对现有合成治疗药物耐药性的持久方法。在这项研究中,我们利用综合计算方法研究了天然存在的 C-O-C 双黄酮类化合物对流感神经氨酸酶(NA)的抑制潜力。研究采用分子对接法找出了具有高结合亲和力的双黄酮类化合物,并进行了100 ns的分子动力学模拟,以考察命中分子在流感NA结合口袋中的稳定性、结合模式和引发的相互作用。利用 swissADME 对命中的双黄酮类化合物的生物利用度和药代动力学特性进行了研究。分子对接研究确定了洛芬龙 L、去甲黄酮、羊毛黄酮、普拉文他黄酮和赭黄酮为命中分子,其结合亲和力为-9.9至-9.3 kcal/mol。分子动力学模拟得到的均方根偏差和均方根波动图显示,所选的双黄酮类化合物在酶的结合口袋中相当稳定。ADMET 研究表明,排名靠前的双黄酮类化合物具有良好的药代动力学和生物利用度特性。此外,密度泛函理论研究表明,入选的热门次生代谢物具有良好的药理特性。因此,这些化合物对病毒神经氨酸酶的抑制活性可能有助于流感感染的治疗。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Deciphering the influenza neuraminidase inhibitory potential of naturally occurring biflavonoids: An in silico approach
Influenza infection poses a significant threat to the existence of humans and animals. Its inhibition by secondary metabolites may proffer a lasting solution to its resistance to available synthetic therapeutic agents. In this study, we investigated the influenza neuraminidase (NA) inhibitory potential of naturally occurring C–O–C biflavonoids using integrated computational approaches. The molecular docking method was employed to identify biflavonoids with high binding affinities, and molecular dynamics simulation was performed for 100 ns to examine the stability, binding mode, and interactions elicited by the hit molecules in influenza NA-binding pocket. The bioavailability and pharmacokinetic properties of the hit biflavonoids were examined using swissADME. The molecular docking studies identified lophirone L, delicaflavone, lanaroflavone, pulvinatabiflavone, and ochnaflavone as the hit molecules with the binding affinity of −9.9 to −9.3 kcal/mol. The root means square deviation and root mean square fluctuation plots obtained from the molecular dynamics simulation showed that the selected biflavonoids were reasonably stable at the enzyme’s binding pocket. The ADMET studies showed that the top-ranked biflavonoids exhibit good pharmacokinetic and bioavailability properties. Furthermore, the density functional theory studies showed that the selected hit secondary metabolite possesses good pharmacological properties. Thus, the inhibitory activities of these compounds on viral neuraminidase could be helpful in the management of influenza infections.
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来源期刊
Open Chemistry
Open Chemistry CHEMISTRY, MULTIDISCIPLINARY-
CiteScore
3.80
自引率
4.30%
发文量
90
审稿时长
6 weeks
期刊介绍: Open Chemistry is a peer-reviewed, open access journal that publishes original research, reviews and short communications in the fields of chemistry in an ongoing way. The central goal is to provide a hub for researchers working across all subjects to present their discoveries, and to be a forum for the discussion of the important issues in the field. The journal is the premier source for cutting edge research in fundamental chemistry and it provides high quality peer review services for its authors across the world. Moreover, it allows for libraries everywhere to avoid subscribing to multiple local publications, and to receive instead all the necessary chemistry research from a single source available to the entire scientific community.
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