单调布尔函数的直接邻域

José E. R. Cury, Patrícia Tenera Roxo, Vasco Manquinho, Claudine Chaouiya, Pedro T. Monteiro
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引用次数: 0

摘要

布尔网络是研究遗传和信号网络行为的相关数学模型。这些网络定义了分子节点之间的调控影响,每个节点都与一个布尔变量和一个调控(局部)函数相关联,该函数根据分子节点的调控因子指定其动态行为。然而,现有数据大多不足以充分参数化一个模型,即为每个节点唯一定义一个调控函数。为了支持模型参数化,本文提出了与给定调节结构兼容的布尔函数集,即单调非退化布尔函数的部分有序集。更准确地说,我们提出了获得该集合中任何函数的直接邻域的原始规则。除了理论上的意义之外,我们提出的结果将有助于开发更有效的布尔网络合成和修正方法,并从逐步探索调控函数的邻域中获益。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Immediate Neighbours of Monotone Boolean Functions
Boolean networks constitute relevant mathematical models to study the behaviours of genetic and signalling networks. These networks define regulatory influences between molecular nodes, each being associated to a Boolean variable and a regulatory (local) function specifying its dynamical behaviour depending on its regulators. However, existing data is mostly insufficient to adequately parametrise a model, that is to uniquely define a regulatory function for each node. With the intend to support model parametrisation, this paper presents results on the set of Boolean functions compatible with a given regulatory structure, i.e. the partially ordered set of monotone non-degenerate Boolean functions. More precisely, we present original rules to obtain the direct neighbours of any function of this set. Besides a theoretical interest, presented results will enable the development of more efficient methods for Boolean network synthesis and revision, benefiting from the progressive exploration of the vicinity of regulatory functions.
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