利用 Derek Nexus 和 QSAR 工具箱对药物和化学品进行硅学光毒性预测。

IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL
Atla-Alternatives To Laboratory Animals Pub Date : 2024-07-01 Epub Date: 2024-06-23 DOI:10.1177/02611929241256040
Varun Ahuja, Gowrav Adiga Perdur, Zabiullah Aj, Mohan Krishnappa, Helena Kandarova
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引用次数: 0

摘要

光毒性测试对于评估药物和化学品暴露在阳光下可能对人体皮肤产生的有害影响至关重要。传统的小鼠、大鼠和豚鼠体内模型,以及 3T3 中性红吸收光毒性试验等体外试验和基于使用重建人体表皮的方法,都已用于光毒性测试。虽然这些方法非常有价值,但在时间和资源方面都很昂贵。因此,基于预测软件工具的硅学方法可以提供更快速、更经济的光毒性筛选解决方案。考虑到这一目标,本研究评估了两种硅学工具--Derek Nexus 6.1.0/Derek Knowledge Base 2020 1.0(拉萨有限公司,英国)和经济合作与发展组织(OECD)开发的 QSAR 工具箱(v 4.5)--预测不同类别物质光毒性的能力。Derek Nexus 和 QSAR 工具箱在预测药物和其他化学品的光毒性方面都非常有用。Derek Nexus 预测化合物光毒性的灵敏度为 63%,特异性为 93%,阳性预测值为 90%,阴性预测值为 69%,总体准确率为 77%,均衡准确率为 78%。QSAR 工具箱的灵敏度为 73%,特异性为 85%,阳性预测值为 85%,阴性预测值为 74%,总体准确率为 79%,平衡准确率为 79%。结果表明,Derek Nexus 和 QSAR 工具箱可以有效地融入药物和化学品的光毒性测试工作流程。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
In Silico Phototoxicity Prediction of Drugs and Chemicals by using Derek Nexus and QSAR Toolbox.

Phototoxicity testing is crucial for evaluating the potential harmful effects of pharmaceuticals and chemicals on human skin when exposed to sunlight. Traditional in vivo models involving mice, rats, guinea pigs, as well as in vitro assays such as the 3T3 Neutral Red Uptake phototoxicity assay and methods based on the use of reconstructed human epidermis, have been established for phototoxicity testing. While these approaches are extremely valuable, they are costly in terms of both time and resources. Consequently, in silico approaches based on the use of predictive software tools can offer more rapid and cost-effective phototoxicity screening solutions. With this goal in mind, the current study evaluated two in silico tools - Derek Nexus 6.1.0/Derek Knowledge Base 2020 1.0 (Lhasa Limited, UK) and the QSAR Toolbox (v 4.5) developed by the Organisation for Economic Co-operation and Development (OECD) - for their capacity to predict the phototoxicity of several substances from diverse classes. Derek Nexus and the QSAR Toolbox were both found to be very useful for predicting the phototoxicity of drugs and other chemicals. Derek Nexus predicted phototoxicity of the compounds, with a sensitivity of 63%, specificity of 93%, Positive Predictive Values of 90% and Negative Predictive Value of 69%, overall accuracy of 77% and balanced accuracy of 78%. The QSAR Toolbox achieved sensitivity of 73%, specificity of 85%, Positive Predictive Value of 85% and Negative Predictive Value of 74%, overall accuracy of 79% and balanced accuracy of 79%. The results show that Derek Nexus and the QSAR Toolbox can be usefully incorporated in the workflow of phototoxicity testing for pharmaceuticals and chemicals.

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来源期刊
CiteScore
3.80
自引率
3.70%
发文量
60
审稿时长
>18 weeks
期刊介绍: Alternatives to Laboratory Animals (ATLA) is a peer-reviewed journal, intended to cover all aspects of the development, validation, implementation and use of alternatives to laboratory animals in biomedical research and toxicity testing. In addition to the replacement of animals, it also covers work that aims to reduce the number of animals used and refine the in vivo experiments that are still carried out.
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