基于现实主义的可扩展亲缘关系本体论。

CEUR workshop proceedings Pub Date : 2023-01-01
Michael Rabenberg, Anuwat Pengput, Werner Ceusters
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引用次数: 0

摘要

充分表达亲属关系对于各种医学和生物医学应用至关重要。目前已经有多个亲属关系本体被提出,但迄今为止还没有一个是按照基本形式本体设计的。在本文中,我们提出了一种新的亲属关系本体,它具有以下特点:(1) 它完全用一阶逻辑公理化,遵循 BFO2020-FOL 中提出的谓词形成规则;(2) 它被模块化为 6 个用通用逻辑接口格式(CLIF)编写的独立文件,每个文件都可以根据具体需要导入、(3) 它提供了连接 SNOMED CT 和 SNOMED CT 的桥接公理,以及 (4) 它包含一个额外的公理模块,这些公理在简单措辞时并不完全正确,但经过精心设计,可以突出它们所代表的不寻常的亲缘关系,并可用于对可能的数据录入错误发出警报。我们将介绍设计时的考虑因素和遇到的挑战。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
An Extendible Realism-Based Ontology for Kinship.

Adequately representing kinship relations is crucial for a variety of medical and biomedical applications. Several kinship ontologies have been proposed but none of them have been designed thus far in line with the Basic Formal Ontology. In this paper, we propose a novel kinship ontology that exhibits the following characteristics: (1) it is fully axiomatized in First Order Logic following the rules governing predicate formation as proposed in BFO2020-FOL, (2) it is modularized in 6 separate files written in the Common Logic Interface Format (CLIF) each one of which can be imported based on specific needs, (3) it provides bridging axioms to and from SNOMED CT, and (4) it contains an extra module with axioms which would not be literally true when phrased naively but are crafted in such a way that they highlight the unusual kinship relations they represent and can be used to generate alerts on possible data entry mistakes. We describe design considerations and challenges encountered.

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