化学信息回归方法及其适用领域。

IF 2.8 4区 医学 Q3 CHEMISTRY, MEDICINAL
Molecular Informatics Pub Date : 2024-07-01 Epub Date: 2024-05-28 DOI:10.1002/minf.202400018
Thomas-Martin Dutschmann, Valerie Schlenker, Knut Baumann
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引用次数: 0

摘要

随着人们对化学信息模型不确定性的兴趣与日俱增,需要对最广泛使用的回归技术以及如何估计其可靠性进行总结。回归模型学习从解释变量空间到连续输出值空间的映射。除其他局限性外,模型的预测性能还受到用于模型拟合的训练数据的限制。通过离群点检测方法识别异常对象可以提高模型的性能。此外,正确的模型评估还需要定义模型的局限性,也就是通常所说的适用范围。与某些分类器类似,一些回归技术带有量化其(不)确定性的内置方法或增强功能,而另一些则依赖于通用程序。本文将解释其工作原理的理论背景,以及如何推导出适用范围的具体和一般定义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Chemoinformatic regression methods and their applicability domain.

The growing interest in chemoinformatic model uncertainty calls for a summary of the most widely used regression techniques and how to estimate their reliability. Regression models learn a mapping from the space of explanatory variables to the space of continuous output values. Among other limitations, the predictive performance of the model is restricted by the training data used for model fitting. Identification of unusual objects by outlier detection methods can improve model performance. Additionally, proper model evaluation necessitates defining the limitations of the model, often called the applicability domain. Comparable to certain classifiers, some regression techniques come with built-in methods or augmentations to quantify their (un)certainty, while others rely on generic procedures. The theoretical background of their working principles and how to deduce specific and general definitions for their domain of applicability shall be explained.

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来源期刊
Molecular Informatics
Molecular Informatics CHEMISTRY, MEDICINAL-MATHEMATICAL & COMPUTATIONAL BIOLOGY
CiteScore
7.30
自引率
2.80%
发文量
70
审稿时长
3 months
期刊介绍: Molecular Informatics is a peer-reviewed, international forum for publication of high-quality, interdisciplinary research on all molecular aspects of bio/cheminformatics and computer-assisted molecular design. Molecular Informatics succeeded QSAR & Combinatorial Science in 2010. Molecular Informatics presents methodological innovations that will lead to a deeper understanding of ligand-receptor interactions, macromolecular complexes, molecular networks, design concepts and processes that demonstrate how ideas and design concepts lead to molecules with a desired structure or function, preferably including experimental validation. The journal''s scope includes but is not limited to the fields of drug discovery and chemical biology, protein and nucleic acid engineering and design, the design of nanomolecular structures, strategies for modeling of macromolecular assemblies, molecular networks and systems, pharmaco- and chemogenomics, computer-assisted screening strategies, as well as novel technologies for the de novo design of biologically active molecules. As a unique feature Molecular Informatics publishes so-called "Methods Corner" review-type articles which feature important technological concepts and advances within the scope of the journal.
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