{"title":"肠道微生物群与过敏性鼻炎之间的遗传关联:LDSC 和 MR 分析","authors":"XuWen Zheng, MaoBing Chen, Zhuang Yi, Jin Xu, Liang Zhao, YongJun Qian, WenMing Shen","doi":"10.3389/fmicb.2024.1395340","DOIUrl":null,"url":null,"abstract":"Several studies have suggested a potential link between allergic rhinitis (AR) and gut microbiota. In response, we conducted a meta-analysis of Linkage Disequilibrium Score Regression (LDSC) and Mendelian randomization (MR) to detect their genetic associations.Summary statistics for 211 gut microbiota taxa were gathered from the MiBioGen study, while data for AR were sourced from the Pan-UKB, the FinnGen, and the Genetic Epidemiology Research on Aging (GERA). The genetic correlation between gut microbiota and AR was assessed using LDSC. The principal estimate of causality was determined using the Inverse-Variance Weighted (IVW) method. To assess the robustness of these findings, sensitivity analyses were conducted employing methods such as the weighted median, MR-Egger, and MR-PRESSO. The summary effect estimates of LDSC, forward MR and reverse MR were combined using meta-analysis for AR from different data resources.Our study indicated a significant genetic correlation between genus Sellimonas (Rg = −0.64, p = 3.64 × 10−5, Adjust_P = 3.64 × 10−5) and AR, and a suggestive genetic correlation between seven bacterial taxa and AR. Moreover, the forward MR analysis identified genus Gordonibacter, genus Coprococcus2, genus LachnospiraceaeUCG010, genus Methanobrevibacter, and family Victivallaceae as being suggestively associated with an increased risk of AR. The reverse MR analysis indicated that AR was suggestively linked to an increased risk for genus Coprococcus2 and genus RuminococcaceaeUCG011.Our findings indicate a causal relationship between specific gut microbiomes and AR. This enhances our understanding of the gut microbiota’s contribution to the pathophysiology of AR and lays the groundwork for innovative approaches and theoretical models for future prevention and treatment strategies in this patient population.","PeriodicalId":509565,"journal":{"name":"Frontiers in Microbiology","volume":"1 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Genetic associations between gut microbiota and allergic rhinitis: an LDSC and MR analysis\",\"authors\":\"XuWen Zheng, MaoBing Chen, Zhuang Yi, Jin Xu, Liang Zhao, YongJun Qian, WenMing Shen\",\"doi\":\"10.3389/fmicb.2024.1395340\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Several studies have suggested a potential link between allergic rhinitis (AR) and gut microbiota. In response, we conducted a meta-analysis of Linkage Disequilibrium Score Regression (LDSC) and Mendelian randomization (MR) to detect their genetic associations.Summary statistics for 211 gut microbiota taxa were gathered from the MiBioGen study, while data for AR were sourced from the Pan-UKB, the FinnGen, and the Genetic Epidemiology Research on Aging (GERA). The genetic correlation between gut microbiota and AR was assessed using LDSC. The principal estimate of causality was determined using the Inverse-Variance Weighted (IVW) method. To assess the robustness of these findings, sensitivity analyses were conducted employing methods such as the weighted median, MR-Egger, and MR-PRESSO. The summary effect estimates of LDSC, forward MR and reverse MR were combined using meta-analysis for AR from different data resources.Our study indicated a significant genetic correlation between genus Sellimonas (Rg = −0.64, p = 3.64 × 10−5, Adjust_P = 3.64 × 10−5) and AR, and a suggestive genetic correlation between seven bacterial taxa and AR. Moreover, the forward MR analysis identified genus Gordonibacter, genus Coprococcus2, genus LachnospiraceaeUCG010, genus Methanobrevibacter, and family Victivallaceae as being suggestively associated with an increased risk of AR. The reverse MR analysis indicated that AR was suggestively linked to an increased risk for genus Coprococcus2 and genus RuminococcaceaeUCG011.Our findings indicate a causal relationship between specific gut microbiomes and AR. 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引用次数: 0
摘要
多项研究表明,过敏性鼻炎(AR)与肠道微生物群之间存在潜在联系。211 个肠道微生物群分类群的汇总统计数据来自 MiBioGen 研究,而 AR 的数据则来自 Pan-UKB、FinnGen 和老龄化遗传流行病学研究 (GERA)。使用 LDSC 评估了肠道微生物群与 AR 之间的遗传相关性。因果关系的主要估计值采用反方差加权法(IVW)确定。为了评估这些发现的稳健性,采用了加权中位数、MR-Egger 和 MR-PRESSO 等方法进行了敏感性分析。我们的研究表明,Sellimonas 属(Rg = -0.64,p = 3.64 × 10-5,Adjust_P = 3.64 × 10-5)与 AR 存在显著的遗传相关性,7 个细菌类群与 AR 存在提示性遗传相关性。此外,正向 MR 分析还发现戈登杆菌属、Coprococcus2 属、LachnospiraceaeUCG010 属、Methanobrevibacter 属和 Victivallaceae 科提示与 AR 风险增加有关。我们的研究结果表明,特定肠道微生物组与 AR 之间存在因果关系。我们的研究结果表明,特定的肠道微生物群与 AR 之间存在因果关系,这加深了我们对肠道微生物群对 AR 病理生理学的贡献的理解,并为该患者群体未来的预防和治疗策略的创新方法和理论模型奠定了基础。
Genetic associations between gut microbiota and allergic rhinitis: an LDSC and MR analysis
Several studies have suggested a potential link between allergic rhinitis (AR) and gut microbiota. In response, we conducted a meta-analysis of Linkage Disequilibrium Score Regression (LDSC) and Mendelian randomization (MR) to detect their genetic associations.Summary statistics for 211 gut microbiota taxa were gathered from the MiBioGen study, while data for AR were sourced from the Pan-UKB, the FinnGen, and the Genetic Epidemiology Research on Aging (GERA). The genetic correlation between gut microbiota and AR was assessed using LDSC. The principal estimate of causality was determined using the Inverse-Variance Weighted (IVW) method. To assess the robustness of these findings, sensitivity analyses were conducted employing methods such as the weighted median, MR-Egger, and MR-PRESSO. The summary effect estimates of LDSC, forward MR and reverse MR were combined using meta-analysis for AR from different data resources.Our study indicated a significant genetic correlation between genus Sellimonas (Rg = −0.64, p = 3.64 × 10−5, Adjust_P = 3.64 × 10−5) and AR, and a suggestive genetic correlation between seven bacterial taxa and AR. Moreover, the forward MR analysis identified genus Gordonibacter, genus Coprococcus2, genus LachnospiraceaeUCG010, genus Methanobrevibacter, and family Victivallaceae as being suggestively associated with an increased risk of AR. The reverse MR analysis indicated that AR was suggestively linked to an increased risk for genus Coprococcus2 and genus RuminococcaceaeUCG011.Our findings indicate a causal relationship between specific gut microbiomes and AR. This enhances our understanding of the gut microbiota’s contribution to the pathophysiology of AR and lays the groundwork for innovative approaches and theoretical models for future prevention and treatment strategies in this patient population.