SLC2A3 是通过肿瘤微环境改变导致头颈部鳞癌发展的潜在因素

IF 3.8 4区 医学 Q2 GENETICS & HEREDITY
Wei Jiang, Sheng Xu, Ping Li
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引用次数: 0

摘要

简介肿瘤免疫在癌症治疗和进展中日益受到关注。然而,了解特定分子影响临床预后和肿瘤微环境(TME)的机制仍是一项挑战:在此,我们应用ESTIMATE算法计算了TCGA中504例HNSC病例的免疫和基质评分。根据免疫和基质评分的中位值对患者进行分组。对临床病理特征和差异表达基因(DEG)进行了分析。随后进行了LASSO、COX回归、生存分析和临床病理特征分析。随后,SLC2A3 被确定为一个预测因素,即 SLC2A3 在 mRNA 和蛋白水平的高表达预示着较差的临床预后。GSEA25099用于免疫浸润的外部验证,组织PCR、IHC和Western Blot用于确认SLC2A3的表达水平:一系列免疫浸润分析表明,SLC2A3的表达与CD8+ T细胞呈负相关,显著影响HNSC的生存预后。在GSEA分析中,SLC2A3的高表达主要富集于免疫相关的生物学过程。同时,SLC2A3的高表达具有更高的TIDE评分,还与一系列影响生存预后的免疫检查点呈强正相关,从而导致更易发生免疫逃逸:结论:SLC2A3是一种潜在的癌基因,也是HNSC发展的一个因素,主要通过改变免疫微环境状态、免疫抑制调节和免疫逃逸来实现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
SLC2A3 is a Potential Factor for Head and Neck Squamous Cancer Development through Tumor Microenvironment Alteration.

Introduction: Tumor immunity has garnered increasing attention in cancer treatment and progression. However, there is still a challenge in understanding the mechanisms of specific molecules affecting the clinical prognosis and tumor microenvironment (TME).

Method: Here, we applied the ESTIMATE algorithm to calculate the immune and stromal scores in 504 HNSC cases from TCGA. Patients were grouped according to the median value of the immune and stromal. Clinicopathological characteristics and differentially expressed genes (DEG) were analyzed. Subsequently, LASSO, COX regression, survival analysis, and clinicopathological characteristics were conducted. Subsequently, SLC2A3 was determined as a predictive factor that high expression of SLC2A3 at the mRNA and protein levels predicted a worse clinical prognosis. GSEA25099 was utilized for external validation of immune infiltration, while tissue PCR, IHC, and Western Blot were used to confirm the expression levels of SLC2A3.

Result: A series of immune-infiltration analyses showed that SLC2A3 expression was negatively correlated with CD8+ T cells, significantly affecting the survival prognosis of HNSC. In the GSEA analysis, the high expression of SLC2A3 was mainly enriched for immune-related biological processes. Meanwhile, high expression of SLC2A3 possessed higher TIDE scores and was also strongly positively correlated with a series of immune checkpoints affecting survival prognosis, thus causing greater susceptibility to immune escape.

Conclusion: Conclusively, SLC2A3 is a potential oncogene and factor of HNSC development, notably by an altered state of the immune microenvironment, immune-suppressive regulation, and immune escape.

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来源期刊
Current gene therapy
Current gene therapy 医学-遗传学
CiteScore
6.70
自引率
2.80%
发文量
46
期刊介绍: Current Gene Therapy is a bi-monthly peer-reviewed journal aimed at academic and industrial scientists with an interest in major topics concerning basic research and clinical applications of gene and cell therapy of diseases. Cell therapy manuscripts can also include application in diseases when cells have been genetically modified. Current Gene Therapy publishes full-length/mini reviews and original research on the latest developments in gene transfer and gene expression analysis, vector development, cellular genetic engineering, animal models and human clinical applications of gene and cell therapy for the treatment of diseases. Current Gene Therapy publishes reviews and original research containing experimental data on gene and cell therapy. The journal also includes manuscripts on technological advances, ethical and regulatory considerations of gene and cell therapy. Reviews should provide the reader with a comprehensive assessment of any area of experimental biology applied to molecular medicine that is not only of significance within a particular field of gene therapy and cell therapy but also of interest to investigators in other fields. Authors are encouraged to provide their own assessment and vision for future advances. Reviews are also welcome on late breaking discoveries on which substantial literature has not yet been amassed. Such reviews provide a forum for sharply focused topics of recent experimental investigations in gene therapy primarily to make these results accessible to both clinical and basic researchers. Manuscripts containing experimental data should be original data, not previously published.
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