{"title":"叶绿素通过 RAF、HAT 和 SET 机制与羟自由基发生反应:理论研究","authors":"Swarnadeep Biswas, Pradeep Kumar Shukla","doi":"10.1007/s11224-024-02331-3","DOIUrl":null,"url":null,"abstract":"<div><p>To understand the scavenging action of chlorophyll (Chla) found in most of the vegetables towards hydroxyl (<span>\\({{\\text{OH}}}^{\\bullet }\\)</span>) radicals, its reactions with <span>\\({{\\text{OH}}}^{\\bullet }\\)</span> radicals via RAF, HAT, and SET mechanisms have been investigated theoretically using two layer ONIOM [M06-2X/6-31G(d) (High):M06-2X/3-21G (Low)] method and M06-2X/6–311 + G(d,p) level of density functional theory. The molecular electrostatic potential (MEP), highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) plots, HOMO–LUMO energy gap, global hardness (η), global softness (S), electronegativity (χ), and electrophilicity index (ω) of Chla molecule were computed and analyzed to determine its stability and reactive sites. It is found that RAF and HAT reactions are exergonic in both gaseous and aqueous media whereas SET reactions are endergonic in both media. However, all the RAF, HAT and SET reactions studied here are found to be more favourable in aqueous media <i>vs.</i> gas phase. The rate constants of RAF reactions at different sites are found to be of the order of ~ 6.2 × 10<sup>7</sup>–1.8 × 10<sup>10</sup> s<sup>−1</sup> indicating that RAF reactions would be appreciably fast. This study concludes that chlorophyll can efficiently scavenge <span>\\({{\\text{OH}}}^{\\bullet }\\)</span> radicals preferably via RAF and HAT mechanisms and intake of water with chlorophyll can enhance its scavenging actions.</p></div>","PeriodicalId":780,"journal":{"name":"Structural Chemistry","volume":"35 6","pages":"1905 - 1916"},"PeriodicalIF":2.1000,"publicationDate":"2024-05-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Reactions of chlorophyll with hydroxyl radicals via RAF, HAT and SET mechanisms: A theoretical study\",\"authors\":\"Swarnadeep Biswas, Pradeep Kumar Shukla\",\"doi\":\"10.1007/s11224-024-02331-3\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>To understand the scavenging action of chlorophyll (Chla) found in most of the vegetables towards hydroxyl (<span>\\\\({{\\\\text{OH}}}^{\\\\bullet }\\\\)</span>) radicals, its reactions with <span>\\\\({{\\\\text{OH}}}^{\\\\bullet }\\\\)</span> radicals via RAF, HAT, and SET mechanisms have been investigated theoretically using two layer ONIOM [M06-2X/6-31G(d) (High):M06-2X/3-21G (Low)] method and M06-2X/6–311 + G(d,p) level of density functional theory. The molecular electrostatic potential (MEP), highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) plots, HOMO–LUMO energy gap, global hardness (η), global softness (S), electronegativity (χ), and electrophilicity index (ω) of Chla molecule were computed and analyzed to determine its stability and reactive sites. It is found that RAF and HAT reactions are exergonic in both gaseous and aqueous media whereas SET reactions are endergonic in both media. However, all the RAF, HAT and SET reactions studied here are found to be more favourable in aqueous media <i>vs.</i> gas phase. The rate constants of RAF reactions at different sites are found to be of the order of ~ 6.2 × 10<sup>7</sup>–1.8 × 10<sup>10</sup> s<sup>−1</sup> indicating that RAF reactions would be appreciably fast. This study concludes that chlorophyll can efficiently scavenge <span>\\\\({{\\\\text{OH}}}^{\\\\bullet }\\\\)</span> radicals preferably via RAF and HAT mechanisms and intake of water with chlorophyll can enhance its scavenging actions.</p></div>\",\"PeriodicalId\":780,\"journal\":{\"name\":\"Structural Chemistry\",\"volume\":\"35 6\",\"pages\":\"1905 - 1916\"},\"PeriodicalIF\":2.1000,\"publicationDate\":\"2024-05-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Structural Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s11224-024-02331-3\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Structural Chemistry","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1007/s11224-024-02331-3","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Reactions of chlorophyll with hydroxyl radicals via RAF, HAT and SET mechanisms: A theoretical study
To understand the scavenging action of chlorophyll (Chla) found in most of the vegetables towards hydroxyl (\({{\text{OH}}}^{\bullet }\)) radicals, its reactions with \({{\text{OH}}}^{\bullet }\) radicals via RAF, HAT, and SET mechanisms have been investigated theoretically using two layer ONIOM [M06-2X/6-31G(d) (High):M06-2X/3-21G (Low)] method and M06-2X/6–311 + G(d,p) level of density functional theory. The molecular electrostatic potential (MEP), highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) plots, HOMO–LUMO energy gap, global hardness (η), global softness (S), electronegativity (χ), and electrophilicity index (ω) of Chla molecule were computed and analyzed to determine its stability and reactive sites. It is found that RAF and HAT reactions are exergonic in both gaseous and aqueous media whereas SET reactions are endergonic in both media. However, all the RAF, HAT and SET reactions studied here are found to be more favourable in aqueous media vs. gas phase. The rate constants of RAF reactions at different sites are found to be of the order of ~ 6.2 × 107–1.8 × 1010 s−1 indicating that RAF reactions would be appreciably fast. This study concludes that chlorophyll can efficiently scavenge \({{\text{OH}}}^{\bullet }\) radicals preferably via RAF and HAT mechanisms and intake of water with chlorophyll can enhance its scavenging actions.
期刊介绍:
Structural Chemistry is an international forum for the publication of peer-reviewed original research papers that cover the condensed and gaseous states of matter and involve numerous techniques for the determination of structure and energetics, their results, and the conclusions derived from these studies. The journal overcomes the unnatural separation in the current literature among the areas of structure determination, energetics, and applications, as well as builds a bridge to other chemical disciplines. Ist comprehensive coverage encompasses broad discussion of results, observation of relationships among various properties, and the description and application of structure and energy information in all domains of chemistry.
We welcome the broadest range of accounts of research in structural chemistry involving the discussion of methodologies and structures,experimental, theoretical, and computational, and their combinations. We encourage discussions of structural information collected for their chemicaland biological significance.