探索苦与甜:大语言模型在分子味觉预测中的应用

IF 5.3 2区 化学 Q1 CHEMISTRY, MEDICINAL
Renxiu Song, Kaifeng Liu, Qizheng He, Fei He* and Weiwei Han*, 
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引用次数: 0

摘要

对苦味和甜味的感知是人类感官体验的一个重要方面。阿斯巴甜是一种广泛使用的甜味剂,被怀疑有致癌风险,人们对长期使用阿斯巴甜的担忧凸显了开发新口味调节剂的重要性。本研究利用 GPT-3.5 和 GPT-4 等大型语言模型(LLM)来预测分子味觉特征,重点是苦甜二分法。采用随机和支架数据分割策略,GPT-4 表现出了卓越的性能,在支架分割下达到了令人印象深刻的 86% 的准确率。此外,ChatGPT 还用于提取与苦味和甜味相关的特定分子特征。利用这些洞察力,成功生成了具有独特味道特征的新型分子化合物。通过分子对接和分子动力学模拟验证了这些化合物的苦味和甜味特性,并通过 ADMET 毒性测试和 DeepSA 合成可行性进一步证实了它们的实用性。这项研究凸显了 LLM 在预测分子性质方面的潜力及其在健康和化学科学方面的意义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Exploring Bitter and Sweet: The Application of Large Language Models in Molecular Taste Prediction

Exploring Bitter and Sweet: The Application of Large Language Models in Molecular Taste Prediction

Exploring Bitter and Sweet: The Application of Large Language Models in Molecular Taste Prediction

The perception of bitter and sweet tastes is a crucial aspect of human sensory experience. Concerns over the long-term use of aspartame, a widely used sweetener suspected of carcinogenic risks, highlight the importance of developing new taste modifiers. This study utilizes Large Language Models (LLMs) such as GPT-3.5 and GPT-4 for predicting molecular taste characteristics, with a focus on the bitter-sweet dichotomy. Employing random and scaffold data splitting strategies, GPT-4 demonstrated superior performance, achieving an impressive 86% accuracy under scaffold partitioning. Additionally, ChatGPT was employed to extract specific molecular features associated with bitter and sweet tastes. Utilizing these insights, novel molecular compounds with distinct taste profiles were successfully generated. These compounds were validated for their bitter and sweet properties through molecular docking and molecular dynamics simulation, and their practicality was further confirmed by ADMET toxicity testing and DeepSA synthesis feasibility. This research highlights the potential of LLMs in predicting molecular properties and their implications in health and chemical science.

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来源期刊
CiteScore
9.80
自引率
10.70%
发文量
529
审稿时长
1.4 months
期刊介绍: The Journal of Chemical Information and Modeling publishes papers reporting new methodology and/or important applications in the fields of chemical informatics and molecular modeling. Specific topics include the representation and computer-based searching of chemical databases, molecular modeling, computer-aided molecular design of new materials, catalysts, or ligands, development of new computational methods or efficient algorithms for chemical software, and biopharmaceutical chemistry including analyses of biological activity and other issues related to drug discovery. Astute chemists, computer scientists, and information specialists look to this monthly’s insightful research studies, programming innovations, and software reviews to keep current with advances in this integral, multidisciplinary field. As a subscriber you’ll stay abreast of database search systems, use of graph theory in chemical problems, substructure search systems, pattern recognition and clustering, analysis of chemical and physical data, molecular modeling, graphics and natural language interfaces, bibliometric and citation analysis, and synthesis design and reactions databases.
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