Yujun Ren, Zhunxuan Wang, Yishan Sun, Hongbin Gong, Su Xie, Ruonan Gao, Xin Chen, Qingchun Li, Shihao Lu, Tao Huang, Min Yang
{"title":"基于 TMT 的妊娠早期家羊血清定量蛋白质组分析","authors":"Yujun Ren, Zhunxuan Wang, Yishan Sun, Hongbin Gong, Su Xie, Ruonan Gao, Xin Chen, Qingchun Li, Shihao Lu, Tao Huang, Min Yang","doi":"10.1071/an22445","DOIUrl":null,"url":null,"abstract":"<strong> Context</strong><p>Timely pregnancy diagnosis is critical for reducing non-production days and improving the reproductive efficiency of sheep flocks.</p><strong> Aims</strong><p>The aim of this study was to investigate the serum proteomic profile of ewes in different gestational stages and explore the potential of differentially expressed proteins as biomarkers for early gestation.</p><strong> Methods</strong><p>Serum samples were collected from two groups: pregnant sheep (<i>n</i> = 4) and non-pregnant sheep (<i>n</i> = 4) on Day 14 after mating. The differentially expressed proteins were detected using tandem mass-tag (TMT) labelling with liquid chromatography tandem-mass spectrometry. The differentially expressed proteins were confirmed using enzyme-linked immunosorbent assay (ELISA). Furthermore, six selected proteins were evaluated in ewes (<i>n</i> = 35) on Day 14 from mating by using ELISA to assess their potential as biomarkers for early pregnancy. Receiver-operating characteristic (ROC) curves were used to analyse the diagnostic accuracy of these proteins.</p><strong> Key results</strong><p>Twenty proteins, of a total of 555 proteins detected, showed differential expression between pregnant and non-pregnant sheep. From the ROC-curve data, CHI3L1 (AUC = 0.992), PSMB4 (AUC = 0.976) and LGALS3BP (AUC = 0.844) had high predictive value in the diagnosis of early pregnancy.</p><strong> Conclusions</strong><p>In this study, CHI3L1, PSMB4 and LGALS3BP were found to be differentially expressed proteins in the serum of pregnant sheep. Therefore, these three proteins carry a high probability as candidate biomarkers for early gestational embryo attachment in ewes.</p><strong> Implications</strong><p>Early pregnancy diagnosis enables timely identification of non-pregnant ewes, resulting in optimised resource allocation and enhanced economic benefits for farmers by reducing production costs.</p>","PeriodicalId":7895,"journal":{"name":"Animal Production Science","volume":"60 1","pages":""},"PeriodicalIF":1.4000,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"TMT-based quantitative proteomic analysis of serum from domestic sheep in early pregnancy\",\"authors\":\"Yujun Ren, Zhunxuan Wang, Yishan Sun, Hongbin Gong, Su Xie, Ruonan Gao, Xin Chen, Qingchun Li, Shihao Lu, Tao Huang, Min Yang\",\"doi\":\"10.1071/an22445\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<strong> Context</strong><p>Timely pregnancy diagnosis is critical for reducing non-production days and improving the reproductive efficiency of sheep flocks.</p><strong> Aims</strong><p>The aim of this study was to investigate the serum proteomic profile of ewes in different gestational stages and explore the potential of differentially expressed proteins as biomarkers for early gestation.</p><strong> Methods</strong><p>Serum samples were collected from two groups: pregnant sheep (<i>n</i> = 4) and non-pregnant sheep (<i>n</i> = 4) on Day 14 after mating. The differentially expressed proteins were detected using tandem mass-tag (TMT) labelling with liquid chromatography tandem-mass spectrometry. The differentially expressed proteins were confirmed using enzyme-linked immunosorbent assay (ELISA). Furthermore, six selected proteins were evaluated in ewes (<i>n</i> = 35) on Day 14 from mating by using ELISA to assess their potential as biomarkers for early pregnancy. Receiver-operating characteristic (ROC) curves were used to analyse the diagnostic accuracy of these proteins.</p><strong> Key results</strong><p>Twenty proteins, of a total of 555 proteins detected, showed differential expression between pregnant and non-pregnant sheep. From the ROC-curve data, CHI3L1 (AUC = 0.992), PSMB4 (AUC = 0.976) and LGALS3BP (AUC = 0.844) had high predictive value in the diagnosis of early pregnancy.</p><strong> Conclusions</strong><p>In this study, CHI3L1, PSMB4 and LGALS3BP were found to be differentially expressed proteins in the serum of pregnant sheep. Therefore, these three proteins carry a high probability as candidate biomarkers for early gestational embryo attachment in ewes.</p><strong> Implications</strong><p>Early pregnancy diagnosis enables timely identification of non-pregnant ewes, resulting in optimised resource allocation and enhanced economic benefits for farmers by reducing production costs.</p>\",\"PeriodicalId\":7895,\"journal\":{\"name\":\"Animal Production Science\",\"volume\":\"60 1\",\"pages\":\"\"},\"PeriodicalIF\":1.4000,\"publicationDate\":\"2024-05-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Animal Production Science\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://doi.org/10.1071/an22445\",\"RegionNum\":4,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"Agricultural and Biological Sciences\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Animal Production Science","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.1071/an22445","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
TMT-based quantitative proteomic analysis of serum from domestic sheep in early pregnancy
Context
Timely pregnancy diagnosis is critical for reducing non-production days and improving the reproductive efficiency of sheep flocks.
Aims
The aim of this study was to investigate the serum proteomic profile of ewes in different gestational stages and explore the potential of differentially expressed proteins as biomarkers for early gestation.
Methods
Serum samples were collected from two groups: pregnant sheep (n = 4) and non-pregnant sheep (n = 4) on Day 14 after mating. The differentially expressed proteins were detected using tandem mass-tag (TMT) labelling with liquid chromatography tandem-mass spectrometry. The differentially expressed proteins were confirmed using enzyme-linked immunosorbent assay (ELISA). Furthermore, six selected proteins were evaluated in ewes (n = 35) on Day 14 from mating by using ELISA to assess their potential as biomarkers for early pregnancy. Receiver-operating characteristic (ROC) curves were used to analyse the diagnostic accuracy of these proteins.
Key results
Twenty proteins, of a total of 555 proteins detected, showed differential expression between pregnant and non-pregnant sheep. From the ROC-curve data, CHI3L1 (AUC = 0.992), PSMB4 (AUC = 0.976) and LGALS3BP (AUC = 0.844) had high predictive value in the diagnosis of early pregnancy.
Conclusions
In this study, CHI3L1, PSMB4 and LGALS3BP were found to be differentially expressed proteins in the serum of pregnant sheep. Therefore, these three proteins carry a high probability as candidate biomarkers for early gestational embryo attachment in ewes.
Implications
Early pregnancy diagnosis enables timely identification of non-pregnant ewes, resulting in optimised resource allocation and enhanced economic benefits for farmers by reducing production costs.
期刊介绍:
Research papers in Animal Production Science focus on improving livestock and food production, and on the social and economic issues that influence primary producers. The journal (formerly known as Australian Journal of Experimental Agriculture) is predominantly concerned with domesticated animals (beef cattle, dairy cows, sheep, pigs, goats and poultry); however, contributions on horses and wild animals may be published where relevant.
Animal Production Science is published with the endorsement of the Commonwealth Scientific and Industrial Research Organisation (CSIRO) and the Australian Academy of Science.