通过分子对接从数据库中对具有呋喃或吲哚核的杂环化合物的抗癌活性进行硅学筛选,并通过再对接对该方法进行验证

Thomas Kurian
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研究目的本研究旨在根据文献综述,从化合物数据库中筛选出九种结构中含有呋喃或吲哚与氧的杂环配体,对它们在酪氨酸激酶受体上的抗癌活性进行预测:受体与配体 Gliteritinib 的复合物是从蛋白质数据库中下载的。本研究使用的配体为 5-氟-1H-吲哚-2-羧酸、2(5H)-呋喃酮戊酸呋喃酯、呋喃-2,5-二甲醛、2,5-呋喃二甲酸、呋喃-2-基(1H-吲哚-3-基)甲酮、3-甲酰基-1H-吲哚-1-羧酸叔丁酯、7-氨基-5-氟吲哚啉-2-酮、7H-呋喃并[3,2-g]色烯-7-酮。研究使用 Pyrex 分子对接软件进行分析。研究结果通过使用配体 Gliteritinib 的重新对接技术进行了验证:结果:3-甲酰基-1H-吲哚-1-羧酸叔丁酯的对接得分为 (-7.8),对接结果良好,因此可以预测其活性。呋喃-2-基(1H-吲哚-3-基)美沙酮和 7H-呋喃并[3,2-g]色烯-7-酮的对接得分也很高,分别为 (-7.5) 和 (-7.3)。重新定位过程的结果为 (-9.2):结论:这些值与主平方根值相当,表明该方法具有可重复性。这一发现有助于深入了解抗癌活性的 Insilco 对接,并进一步探索用于 Insilco 筛选的植物化学物质。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
IN SILICO SCREENING BY MOLECULAR DOCKING OF HETEROCYCLIC COMPOUNDS WITH FURAN OR INDOLE NUCLEUS FROM DATABASE FOR ANTICANCER ACTIVITY AND VALIDATION OF THE METHOD BY REDOCKING
Objective: This study aims to perform in silico screening of nine heterocyclic ligands containing furan or indole with oxygen in their structure selected from the compound database based on a literature review for predicting their anticancer activity on tyrosine kinase receptor receptors. Methods: The receptor is complex with the ligand Gliteritinib and was downloaded from the protein database. The ligands used for this study were 5-fluoro-1H-indole-2-carboxylic acid,2(5H)-Furanone Furfuryl pentanoate, Furan-2,5-dicarbaldehyde, 2,5-Furandicarboxylic acid, Furan-2-yl(1H-indol-3-yl) methanone, Tert-butyl 3-formyl-1H-indole-1-carboxylate,7-Amino-5-fluoroindolin-2-one,7H-Furo[3,2-g]chromen-7-one. Pyrex molecular docking software was used to perform the analysis. The study was validated using a re-docking technique using the ligand Gliteritinib. Results: A good docking score of (-7.8) was obtained for tert-butyl 3-formyl-1H-indole-1-carboxylate, leading to promising activity prediction. Furan-2-yl(1H-indol-3-yl) methadone and 7H-Furo[3,2-g]chromen-7-one also scored well with (-7.5) and (-7.3) respectively. The redocking process resulted in a score of (-9.2). Conclusion: Values are comparable to the root primary square value, showing the reproducibility of this method. The finding gives insight into Insilco docking for anticancer activity and further exploration of phytochemicals for Insilco screening.
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