确定间皮瘤中与铁蛋白沉积相关的预后基因特征

IF 2.4 3区 生物学 Q2 GENETICS & HEREDITY
Gene Pub Date : 2024-04-24 DOI:10.1016/j.gene.2024.148498
Zairui Wang , Jialin Huang , MinYang , Liren Fu , Shijie Liu , Jianghua Huang , Jingjing Han , Xiaohui Zhao
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引用次数: 0

摘要

间皮瘤是一种不常见但侵袭性极强的恶性肿瘤,对现有治疗方法的有效性提出了挑战。铁凋亡是一种非凋亡的细胞死亡机制,与各种癌症的进展有很大关系。必须承认,铁凋亡与各种癌症的进展之间存在着重要联系。然而,间皮瘤中铁蛋白沉积调节因子的确切作用仍然是个谜。在我们的调查中,我们初步研究了 24 个铁蛋白沉积调节因子在间皮瘤领域的预后意义。我们的观察发现,CARS1、CDKN1A、TFRC、FANCD2、FDFT1、HSPB1、SLC1A5、SLC7A11 的表达水平升高,加上 DPP4 表达降低,表明预后不良。基于之前讨论过的九个预后基因,铁蛋白沉积预后模型为预测间皮瘤患者的生存期提供了一种可靠的方法,而且非常精确。此外,在间皮瘤中,这些预后铁蛋白沉积调节因子与免疫细胞浸润、肿瘤突变负荷、微卫星不稳定性和 PD-L1 表达等参数之间存在明显的相关性。我们的分析表明,在这九个与预后相关的铁沉降调节因子中,FANCD2对预后的影响最为明显。随后,我们利用本机构的临床标本进行了验证,从而证实 FANCD2 的高表达是间皮瘤不良预后的明显预兆。体外实验显示,敲除 FANCD2 能明显抑制间皮瘤细胞的增殖、迁移和吸引免疫细胞的能力。此外,我们的研究结果还表明,降低 FANCD2 的水平会增加间皮瘤细胞对铁变态反应诱导剂的脆弱性。此外,一项广泛的泛癌症分析发现,FANCD2 和与免疫检查点相关的基因表达之间存在密切联系,从而表明在广泛的癌症类型中,FANCD2 会对预后产生不利影响。要验证这些发现,还需要进行更多的研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification of the ferroptosis-related prognostic gene signature in mesothelioma

Mesothelioma, an uncommon yet highly aggressive malignant neoplasm, presents challenges in the effectiveness of current therapeutic approaches. Ferroptosis, a non-apoptotic mechanism of cellular demise, exhibits a substantial association with the progression of diverse cancer forms. It is important to acknowledge that there exists a significant association between ferroptosis and the advancement of various forms of cancer. Nevertheless, the precise role of ferroptosis regulatory factors within the context of mesothelioma remains enigmatic. In our investigation, we initially scrutinized the prognostic significance of 24 ferroptosis regulatory factors in the realm of mesothelioma. Our observations unveiled that heightened expression levels of CARS1, CDKN1A, TFRC, FANCD2, FDFT1, HSPB1, SLC1A5, SLC7A11, coupled with reduced DPP4 expression, were indicative of an unfavorable prognosis. Built upon the nine previously discussed prognostic genes, the ferroptosis prognostic model offers a reliable means to forecast mesothelioma patients' survival with a substantial degree of precision. Furthermore, a notable correlation emerged between these prognostic ferroptosis regulators and parameters such as immune cell infiltration, tumor mutation burden, microsatellite instability, and PD-L1 expression in the context of mesothelioma. Within this cadre of nine ferroptosis regulatory factors with prognostic relevance, FANCD2 exhibited the most pronounced prognostic influence, as elucidated by our analyses. Subsequently, we executed a validation process employing clinical specimens sourced from our institution, thus confirming that heightened FANCD2 expression is a discernible harbinger of an adverse prognosis in the context of mesothelioma. In vitro experiments revealed that knocking down FANCD2 markedly suppressed the proliferation, migration, and ability of mesothelioma cells to attract immune cells. Furthermore, our findings also showed that reducing FANCD2 levels heightened the vulnerability of mesothelioma cells to inducers of ferroptosis. Furthermore, an extensive pan-cancer analysis uncovered a robust association between FANCD2 and the gene expression linked to immune checkpoints, thereby signifying an adverse prognosis across a broad spectrum of cancer types. Additional research is warranted to validate these findings.

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来源期刊
Gene
Gene 生物-遗传学
CiteScore
6.10
自引率
2.90%
发文量
718
审稿时长
42 days
期刊介绍: Gene publishes papers that focus on the regulation, expression, function and evolution of genes in all biological contexts, including all prokaryotic and eukaryotic organisms, as well as viruses.
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