综合分析单细胞和大量 RNA 测序,构建胰腺癌 CD8 + T 细胞相关免疫基因特征

Yuzhi Liu, Fei Xu, Anyi Jiang, Jie Ding, Chungao Li, Ming Quan
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引用次数: 0

摘要

胰腺导管腺癌(PDAC)是一种恶性程度很高的肿瘤,对免疫疗法的反应很差。在各种实体瘤中,CD8 + T 细胞浸润对免疫疗法的关键影响已被证实。然而,CD8 + T细胞相关免疫基因(TIGs)对肿瘤免疫微环境的具体贡献仍不清楚。 我们从 INNATE 和 IMMPORT 数据库中获得了 CD8 + T 细胞相关免疫基因。我们利用单变量分析和套索回归分析筛选了枢纽TIGs,并建立了预后特征--TIGs评分。该评分用于评估预后、免疫细胞浸润、癌症相关信号通路以及免疫疗法的潜在反应性。我们利用 GSE183795 和 GE212966 数据集的转录组数据和单细胞数据来验证研究结果的可靠性。 我们的研究结果表明,TIGs得分低的患者具有更强的免疫效应功能和免疫检查点激活,从而对PD-L1抑制剂产生更有利的反应。TIGs评分与各种分子特征和临床结果(如肿瘤突变负荷、多种肿瘤相关通路和化疗药物敏感性)有明显相关性。PSME2被确定为预测PDAC患者生存期的潜在预后生物标志物。 这项研究阐明了 TIG 在胰腺癌肿瘤免疫微环境中错综复杂的调控机制。我们的研究结果有力地表明,TIGs评分是预后和免疫治疗反应性的可靠预后标志物。此外,靶向 PSME2 可为提高胰腺癌免疫疗法的有效性提供一条新途径。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Integrated analysis of single-cell and bulk RNA sequencing to construct a CD8 + T cell-related immune gene signature in pancreatic cancer
Pancreatic ductal adenocarcinoma (PDAC) is a highly malignant tumor that responds poorly to immunotherapy. The pivotal influence of CD8 + T-cell infiltration on immunotherapy has been documented in various solid tumors. However, the specific contribution of CD8 + T cell-associated immune genes (TIGs) to the tumor immune microenvironment remains unclear. We obtained CD8 + T cell-related immune genes from the INNATE and IMMPORT databases. Univariate analysis and lasso regression analysis were utilized to screen hub TIGs and develop a prognostic signature, the TIGs score. This score was used to evaluate prognosis, immunocyte infiltration, cancer-associated signaling pathways, and the potential responsiveness of immunotherapy. The transcriptomic data and single-cell data from the GSE183795 and GE212966 datasets are employed to validate the reliability of the findings. Our findings suggest that patients with low TIGs scores have stronger immune effector functions and immune checkpoint activation, resulting in a more favorable response to PD-L1 inhibitors. TIGs scores were significantly correlated with various molecular characteristics and clinical outcomes, such as tumor mutation burden, multiple tumor-associated pathways, and chemotherapeutic drug sensitivity. PSME2 was identified as a potential prognostic biomarker for predicting survival in patients with PDAC. This study elucidates the intricate regulatory mechanisms of TIGs within the tumor immune microenvironment of pancreatic cancer. Our findings strongly suggest that the TIGs score is a robust prognostic marker for prognosis and immunotherapy responsiveness. Additionally, targeting PSME2 may offer a novel avenue for enhancing the effectiveness of immunotherapy in pancreatic cancer.
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