{"title":"甘草甜素对 Sars-Cov-2 病毒 E 蛋白跨膜域特性的脂质介导效应","authors":"P. A. Kononova, O. Yu. Selyutina, N. E. Polyakov","doi":"10.1134/S1990793124010299","DOIUrl":null,"url":null,"abstract":"<p>The interaction of glycyrrhizin with the transmembrane domain of the E-protein of the SARS-CoV-2 virus (E-protein Trans-Membrane domain, ETM) in a homogeneous aqueous solution and in a model lipid membrane is studied using the selective nuclear Overhauser effect (selective NOESY) and NMR relaxation methods. The selective NOESY shows the presence of the interaction of glycyrrhizin with ETM in an aqueous solution, which is consistent with the published modeling data, which indicate the possibility of penetration of the glycyrrhizin molecule into the channel formed by the ETM molecules. However, this conclusion is not confirmed by the NOESY experiments in the model lipid membranes—bicelles. At the same time, the NMR relaxation method reveals the effect of glycyrrhizin on the mobility of both lipids and ETM molecules in bicelles. This suggests that GA affects the activity of the coronavirus E-protein indirectly through lipids.</p>","PeriodicalId":768,"journal":{"name":"Russian Journal of Physical Chemistry B","volume":null,"pages":null},"PeriodicalIF":1.4000,"publicationDate":"2024-04-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Lipid-Mediated Effect of Glycyrrhizin on the Properties of the Transmembrane Domain of the E-Protein of the Sars-Cov-2 Virus\",\"authors\":\"P. A. Kononova, O. Yu. Selyutina, N. E. Polyakov\",\"doi\":\"10.1134/S1990793124010299\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>The interaction of glycyrrhizin with the transmembrane domain of the E-protein of the SARS-CoV-2 virus (E-protein Trans-Membrane domain, ETM) in a homogeneous aqueous solution and in a model lipid membrane is studied using the selective nuclear Overhauser effect (selective NOESY) and NMR relaxation methods. The selective NOESY shows the presence of the interaction of glycyrrhizin with ETM in an aqueous solution, which is consistent with the published modeling data, which indicate the possibility of penetration of the glycyrrhizin molecule into the channel formed by the ETM molecules. However, this conclusion is not confirmed by the NOESY experiments in the model lipid membranes—bicelles. At the same time, the NMR relaxation method reveals the effect of glycyrrhizin on the mobility of both lipids and ETM molecules in bicelles. This suggests that GA affects the activity of the coronavirus E-protein indirectly through lipids.</p>\",\"PeriodicalId\":768,\"journal\":{\"name\":\"Russian Journal of Physical Chemistry B\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.4000,\"publicationDate\":\"2024-04-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Russian Journal of Physical Chemistry B\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://link.springer.com/article/10.1134/S1990793124010299\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"PHYSICS, ATOMIC, MOLECULAR & CHEMICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Russian Journal of Physical Chemistry B","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1134/S1990793124010299","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"PHYSICS, ATOMIC, MOLECULAR & CHEMICAL","Score":null,"Total":0}
Lipid-Mediated Effect of Glycyrrhizin on the Properties of the Transmembrane Domain of the E-Protein of the Sars-Cov-2 Virus
The interaction of glycyrrhizin with the transmembrane domain of the E-protein of the SARS-CoV-2 virus (E-protein Trans-Membrane domain, ETM) in a homogeneous aqueous solution and in a model lipid membrane is studied using the selective nuclear Overhauser effect (selective NOESY) and NMR relaxation methods. The selective NOESY shows the presence of the interaction of glycyrrhizin with ETM in an aqueous solution, which is consistent with the published modeling data, which indicate the possibility of penetration of the glycyrrhizin molecule into the channel formed by the ETM molecules. However, this conclusion is not confirmed by the NOESY experiments in the model lipid membranes—bicelles. At the same time, the NMR relaxation method reveals the effect of glycyrrhizin on the mobility of both lipids and ETM molecules in bicelles. This suggests that GA affects the activity of the coronavirus E-protein indirectly through lipids.
期刊介绍:
Russian Journal of Physical Chemistry B: Focus on Physics is a journal that publishes studies in the following areas: elementary physical and chemical processes; structure of chemical compounds, reactivity, effect of external field and environment on chemical transformations; molecular dynamics and molecular organization; dynamics and kinetics of photoand radiation-induced processes; mechanism of chemical reactions in gas and condensed phases and at interfaces; chain and thermal processes of ignition, combustion and detonation in gases, two-phase and condensed systems; shock waves; new physical methods of examining chemical reactions; and biological processes in chemical physics.