与 IPB-D2 鸡矿物质含量相关的肌红蛋白基因的遗传关联和表达

P. Liong, A. K. Alfiah, I. Khaerunnisa, S. Darwati, R. Afnan, A. B. Dharmayanthi, M. F. Al-Habib, C. Sumantri
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摘要

肌红蛋白(MB)基因编码肌红蛋白的蛋白质,肌红蛋白是一种存在于肌肉组织中的蛋白质,在结合和储存氧气方面起着至关重要的作用。本研究旨在分析 MB 基因的多态性,研究其与肉中矿物质含量的关系,并分析其在 IPB-D2 鸡肝和大腿肌肉组织中的表达。本研究共使用了55只IPB-D2鸡。分别采用直接测序法、原子吸收光谱法(AAS)和 qRT-PCR 法对基因多态性、矿物质含量定量和基因表达进行了鉴定。本研究使用鸡大腿肌肉和肝脏组织作为 mRNA 的来源。统计分析方法采用卡方检验(chi-square test)检验哈代-温伯格平衡(Hardy-Weinberg equilibrium),T检验(Test)用于矿物质关联分析和基因表达分析。IPB-D2鸡肉中铁、硒、锌和锰的平均含量分别为17.81、0.22、16.50和0.34毫克/千克。在 MB 基因的 5'UTR 中发现了两个 SNP,即 SNP g.17 G>T 和 SNP g.25 T>C。基因型TT(g.17 G>T)和基因型CC(g.25 T>C)与IPB-D2鸡的高铁含量显著相关(P<0.05)。基因表达分析表明,肝脏中 MB mRNA 的表达在高铁(TT/CC)和低铁(GG/TT 和 GT/TC)基因型组合之间没有统计学差异。同时,在大腿肌肉中,TT/CC 基因型组合的 MB mRNA 表达量明显高于 GG/TT 和 GT/TC 基因型组合(P<0.05)。这些结果表明,所发现的 IPB-D2 MB 基因多态性可作为研究其他鸡种类似基因的参考,尤其是铁、硒、锌和锰矿物质含量方面。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genetic Association and Expression of Myoglobin Gene Related to Mineral Content in IPB-D2 Chickens
Myoglobin (MB) gene encodes the protein of myoglobin, which is a protein found in muscle tissues that plays a crucial role in binding and storing oxygen. This study aimed to analyze the polymorphism of the MB gene, examine its relationship with the meat mineral content, and analyze its expression in the liver and thigh muscle tissue of IPB-D2 chicken. A total of 55 IPB-D2 chickens were used in this study. Identification of the gene polymorphism, quantification of the mineral content, and gene expression were performed using the direct sequencing method, the Atomic Absorption Spectroscopy (AAS) method, and the qRT-PCR, respectively. Chicken thigh muscle and liver tissues were used as the source of mRNA in this study. The statistical analysis methods used were the chi-square test to test Hardy-Weinberg equilibrium, and the T-test for mineral association analysis and gene expression analysis. IPB-D2 chicken on average contains 17.81, 0.22, 16.50, and 0.34 mg/kg of Fe, Se, Zn, and Mn, respectively. Two SNPs were found in 5’UTR of the MB gene, namely SNP g.17 G>T and SNP g.25 T>C. Genotype TT (g.17 G>T) and genotype CC (g.25 T>C) were significantly (P<0.05) associated with high Fe content in IPB-D2 chicken. The gene expression analysis showed that MB mRNA expression in the liver was not statistically different between high Fe (TT/CC) and low Fe (GG/TT and GT/TC) genotype combination. Meanwhile, in the thigh muscle, MB mRNA expression in TT/CC genotype combination was significantly higher than GG/TT and GT/TC genotype combination (P<0.05). These results suggest that the identified polymorphisms in the IPB-D2 MB gene could serve as references for investigating similar gene in other chicken breeds, especially regarding Fe, Se, Zn, and Mn mineral content.
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