{"title":"重新解读沃伯格效应,100 年之后:第一原理计量分析,以及从癌细胞中的 ATP 代谢角度进行的解读","authors":"Sunil Nath, Rudi Balling","doi":"10.1093/function/zqae008","DOIUrl":null,"url":null,"abstract":"\n The Warburg Effect is a longstanding enigma in cancer biology. Despite the passage of 100 years since its discovery, and the accumulation of a vast body of research on the subject, no convincing biochemical explanation has been given for the original observations of aerobic glycolysis in cancer cell metabolism. Here we have worked out a first-principles quantitative analysis of the problem from the principles of stoichiometry and available electron balance. The results have been interpreted using Nath's unified theory of energy coupling and ATP synthesis, and the original data of Warburg and colleagues have been analyzed from this new perspective. Use of the biomass yield based on ATP consumed, ${Y}_{X/S}\\ ATP$ has been shown to excellently model the original data on the Warburg Effect with very small standard deviation values, and without employing additional fitted or adjustable parameters. Based on the results of the quantitative analysis, a novel conservative mechanism of synthesis, utilization, and recycling of ATP and other key metabolites (for example, lactate) is proposed. The mechanism offers fresh insights into metabolic symbiosis and coupling within and/or among proliferating cells. The fundamental understanding gained using our approach should help in catalyzing the development of more efficient metabolism-targeting anticancer drugs.","PeriodicalId":503843,"journal":{"name":"Function","volume":"3 6","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"The Warburg Effect Reinterpreted, 100 Years on: A First-principles Stoichiometric Analysis, and Interpretation from the Perspective of ATP Metabolism in Cancer Cells\",\"authors\":\"Sunil Nath, Rudi Balling\",\"doi\":\"10.1093/function/zqae008\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\n The Warburg Effect is a longstanding enigma in cancer biology. Despite the passage of 100 years since its discovery, and the accumulation of a vast body of research on the subject, no convincing biochemical explanation has been given for the original observations of aerobic glycolysis in cancer cell metabolism. Here we have worked out a first-principles quantitative analysis of the problem from the principles of stoichiometry and available electron balance. The results have been interpreted using Nath's unified theory of energy coupling and ATP synthesis, and the original data of Warburg and colleagues have been analyzed from this new perspective. Use of the biomass yield based on ATP consumed, ${Y}_{X/S}\\\\ ATP$ has been shown to excellently model the original data on the Warburg Effect with very small standard deviation values, and without employing additional fitted or adjustable parameters. Based on the results of the quantitative analysis, a novel conservative mechanism of synthesis, utilization, and recycling of ATP and other key metabolites (for example, lactate) is proposed. The mechanism offers fresh insights into metabolic symbiosis and coupling within and/or among proliferating cells. The fundamental understanding gained using our approach should help in catalyzing the development of more efficient metabolism-targeting anticancer drugs.\",\"PeriodicalId\":503843,\"journal\":{\"name\":\"Function\",\"volume\":\"3 6\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-02-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Function\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1093/function/zqae008\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Function","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1093/function/zqae008","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
沃伯格效应是癌症生物学中一个长期存在的谜团。尽管发现沃伯格效应已经有 100 年之久,相关研究也积累了大量成果,但人们仍无法对最初观察到的癌细胞代谢中的有氧糖酵解现象做出令人信服的生化解释。在这里,我们从化学计量学和电子平衡的原理出发,对这一问题进行了第一原理定量分析。我们使用纳特的能量耦合和 ATP 合成统一理论对结果进行了解释,并从这一新角度对沃伯格及其同事的原始数据进行了分析。结果表明,使用基于 ATP 消耗的生物量产量(${Y}_{X/S}\ ATP$ )可以很好地模拟沃伯格效应的原始数据,标准偏差值非常小,而且无需使用额外的拟合或可调参数。根据定量分析的结果,提出了一种关于 ATP 和其他关键代谢物(如乳酸)的合成、利用和循环的新型保守机制。该机制为增殖细胞内部和/或之间的代谢共生和耦合提供了新的见解。利用我们的方法获得的基本认识应有助于开发更有效的代谢靶向抗癌药物。
The Warburg Effect Reinterpreted, 100 Years on: A First-principles Stoichiometric Analysis, and Interpretation from the Perspective of ATP Metabolism in Cancer Cells
The Warburg Effect is a longstanding enigma in cancer biology. Despite the passage of 100 years since its discovery, and the accumulation of a vast body of research on the subject, no convincing biochemical explanation has been given for the original observations of aerobic glycolysis in cancer cell metabolism. Here we have worked out a first-principles quantitative analysis of the problem from the principles of stoichiometry and available electron balance. The results have been interpreted using Nath's unified theory of energy coupling and ATP synthesis, and the original data of Warburg and colleagues have been analyzed from this new perspective. Use of the biomass yield based on ATP consumed, ${Y}_{X/S}\ ATP$ has been shown to excellently model the original data on the Warburg Effect with very small standard deviation values, and without employing additional fitted or adjustable parameters. Based on the results of the quantitative analysis, a novel conservative mechanism of synthesis, utilization, and recycling of ATP and other key metabolites (for example, lactate) is proposed. The mechanism offers fresh insights into metabolic symbiosis and coupling within and/or among proliferating cells. The fundamental understanding gained using our approach should help in catalyzing the development of more efficient metabolism-targeting anticancer drugs.