{"title":"探索抗病毒海洋生物碱对日本脑炎和埃博拉病毒的效力:基于计算的药物再利用评估","authors":"Md. Sajid Ali","doi":"10.52756/ijerr.2024.v37spl.013","DOIUrl":null,"url":null,"abstract":"In the twenty-first century, there have been a number of outbreaks, beginning with dengue, swine flu, Nipah, Ebola, chikungunya, and Zika, which were continuously outbreaks in some specific regions. The mosquito-transmitted flavivirus Japanese encephalitis (JE) virus, similar to dengue fever and West Nile viruses, and the negative-single-stranded Ebola virus (EBOV) are the two most emerging and the WHO's most-prioritized diseases. Natural products have always served as an alternative to mainstream drugs in emergencies. Thus, due to their excellent antiviral activity, the present study focused on marine alkaloids and assessed their potency against the JE and EBOV viruses. Using various bioinformatics tools, we selected 60 different antiviral marine alkaloids for anti-JE activity against RNA-dependent RNA polymerase (PDB ID: 4HDG), NS3-helicase (PDB ID: 2Z83), and NS5-protease (PDB ID: 4K6M), as well as anti-EBOV efficacy targeting nucleoprotein (PDB ID: 4Z9P), viral protein 24 (PDB ID: 4M0Q), and viral protein 40 (PDB ID: 3TCQ). Based on previous antiviral records with combined molecular docking scores, physicochemical, toxicity, pharmacokinetic, and drug-ability profiles, the researchers concluded that manzamines A, F, and X with 6-deoxymanzamine X and 8-hydroxymanzamine may be the best among all 60 candidates for JE and EV infection control. In summary, marine alkaloids exhibit excellent antiviral potency and need to be explored as more bioactive marine candidates for mainstream drug discovery, where bioinformatics tools are a more cost-effective, resource-efficient, and time-saving platform than traditional drug discovery modules to locate most lead candidates to be used in mainstream medicine for emerging health conditions.","PeriodicalId":190842,"journal":{"name":"International Journal of Experimental Research and Review","volume":"41 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-03-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Exploring the Potency of Antiviral Marine Alkaloids Against Japanese encephalitis and Ebola virus: A Computational-Based Assessment for Drug Repurposing Applications\",\"authors\":\"Md. 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Using various bioinformatics tools, we selected 60 different antiviral marine alkaloids for anti-JE activity against RNA-dependent RNA polymerase (PDB ID: 4HDG), NS3-helicase (PDB ID: 2Z83), and NS5-protease (PDB ID: 4K6M), as well as anti-EBOV efficacy targeting nucleoprotein (PDB ID: 4Z9P), viral protein 24 (PDB ID: 4M0Q), and viral protein 40 (PDB ID: 3TCQ). Based on previous antiviral records with combined molecular docking scores, physicochemical, toxicity, pharmacokinetic, and drug-ability profiles, the researchers concluded that manzamines A, F, and X with 6-deoxymanzamine X and 8-hydroxymanzamine may be the best among all 60 candidates for JE and EV infection control. 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引用次数: 0
摘要
进入二十一世纪以来,登革热、猪流感、尼帕、埃博拉、基孔肯雅和寨卡等疫情在一些特定地区连续爆发。蚊子传播的黄病毒日本脑炎(JE)病毒与登革热和西尼罗河病毒相似,而阴性单链埃博拉病毒(EBOV)则是最新近出现的两种疾病,也是世界卫生组织最优先考虑的疾病。在紧急情况下,天然产品一直是主流药物的替代品。因此,由于海洋生物碱具有出色的抗病毒活性,本研究重点关注海洋生物碱,并评估其对 JE 和 EBOV 病毒的效力。利用各种生物信息学工具,我们筛选出了 60 种不同的抗病毒海洋生物碱,它们对 RNA 依赖性 RNA 聚合酶(PDB ID:4HDG)、NS3-helicase(PDB ID:2Z83)和 NS5-helicase(PDB ID:2Z83)具有抗 JE 活性:2Z83)和 NS5 蛋白酶(PDB ID:4K6M)的抗 JE 活性,以及针对核蛋白(PDB ID:4Z9P)、病毒蛋白 24(PDB ID:4M0Q)和病毒蛋白 40(PDB ID:3TCQ)的抗 EBOV 效力。根据以往的抗病毒记录,结合分子对接评分、理化、毒性、药代动力学和药物可药性特征,研究人员得出结论,芒硝胺 A、F 和 X 与 6-脱氧芒硝胺 X 和 8-羟基芒硝胺可能是所有 60 种候选药物中用于控制 JE 和 EV 感染的最佳药物。总之,海洋生物碱表现出卓越的抗病毒效力,需要将其作为更多具有生物活性的海洋候选药物进行主流药物发现的探索。与传统药物发现模块相比,生物信息学工具是一个更具成本效益、资源效率更高、更省时的平台,可以找到大多数先导候选药物,用于治疗新兴健康疾病的主流药物。
Exploring the Potency of Antiviral Marine Alkaloids Against Japanese encephalitis and Ebola virus: A Computational-Based Assessment for Drug Repurposing Applications
In the twenty-first century, there have been a number of outbreaks, beginning with dengue, swine flu, Nipah, Ebola, chikungunya, and Zika, which were continuously outbreaks in some specific regions. The mosquito-transmitted flavivirus Japanese encephalitis (JE) virus, similar to dengue fever and West Nile viruses, and the negative-single-stranded Ebola virus (EBOV) are the two most emerging and the WHO's most-prioritized diseases. Natural products have always served as an alternative to mainstream drugs in emergencies. Thus, due to their excellent antiviral activity, the present study focused on marine alkaloids and assessed their potency against the JE and EBOV viruses. Using various bioinformatics tools, we selected 60 different antiviral marine alkaloids for anti-JE activity against RNA-dependent RNA polymerase (PDB ID: 4HDG), NS3-helicase (PDB ID: 2Z83), and NS5-protease (PDB ID: 4K6M), as well as anti-EBOV efficacy targeting nucleoprotein (PDB ID: 4Z9P), viral protein 24 (PDB ID: 4M0Q), and viral protein 40 (PDB ID: 3TCQ). Based on previous antiviral records with combined molecular docking scores, physicochemical, toxicity, pharmacokinetic, and drug-ability profiles, the researchers concluded that manzamines A, F, and X with 6-deoxymanzamine X and 8-hydroxymanzamine may be the best among all 60 candidates for JE and EV infection control. In summary, marine alkaloids exhibit excellent antiviral potency and need to be explored as more bioactive marine candidates for mainstream drug discovery, where bioinformatics tools are a more cost-effective, resource-efficient, and time-saving platform than traditional drug discovery modules to locate most lead candidates to be used in mainstream medicine for emerging health conditions.